Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02581 ATGCAAATGAGGCAAACCTCCAAAGATGTGATGCTAGGGAGCATTAAAGTCCCTGCTAAGACTCAACTCCTCTTGGCATTGATTGCTGTCCATCATGACCGAAAAATCTGGGGAGAAGATTGTCATGAGTTTAATCCAATGAGATTTAATGAGCCTCGAAAGCATTTAGCCGCACTCTTTCCTTTTGGACACACACGTAAGCAAAGAGCGACACACAAGACACACAAGAAGAAGAATGACACGGCAAGCGAGGAGGACAAGATGCAATGCACACACGGCGGTGCACGGAGGATAGCAGCAGCCGCGACACGGCGCGTGGAGGACAGCAGCAACGACACACACGGAAGTGCGCAGAGGATAGCAGCAGCGAGCGACACACACGACGTGACGGCGGCGCGCGGAGGACAGCAACAGCGAGTTGTGAAATTGGAGCCTCAAAGAGTTCATGGCATTGCCATTGATCCCGAACCTGATTGGAGTTTTGATGCTCGGAGAAAAAGATATGGAAATAGAATCGACAGAGGTAAAACTTTCATATTGAGTGCACATGAGTATGAGACAGAGGACTCAGAGAATGAGGACCACAATGATGAAAAAGTTTTAGTAGAAGGTGGAAAACGGTTTATTTGTGATCTGAGTGACAGTGATGATTATGATGTTACATCTACCTTTGAAGTGCAATCCTACTTGATGTGGGAAGTCAAGGAGGTTGAAGGTGGCTTGTTTGAGCTGATGCATGAACATCAGCTCAAGGTTAAGGATGAAATTAGGAACAAGATCTCTGTATTGGAGACTGCCCTGCCGAATGAAATTCAGGGCTCTACTTCTTCCCTTTTTCGAGTAGAGAAATACAAAGAAACAAGGCAGGAGTTGGACAAAAAGATTGACACCCAATATCAGCGATGGATCTATAAGACCTATGATGTTGTATCTGACAAAATGCTAGACAGTAAAGAGCTAGCAAGAAAGTCAAAAGCAAGTGAATTCATTAAACTTTTGAATGATCCTCAATGTCCTCAATCAATCAGCATCGAGTTATTTGCTAAGAAGGTCCCACATGCAATGGATATTTTGCTAGCTGAGCTTCACAGGGCCTGCCTATACAGTGTCCCAAAGAACATGGTTGACAGCGAGAAGATGAAGAGTACAGAAGATTGTTTACAACAGTTAGAATCATATGTGAAGTTGTATGGTGCACTGGTTCAGACTGAAATTCCAAACATTCAAAATTTGCATGGCTTGCAAGAAGGTTGGGCATGGCTTGCAAGATTCTTGAATGCTCTCCCAGCCAATCAATATACTGCAGTTTCGCTCAAAGCATTCTTGCAAATGGTTGGATTTGGTCTCTTTAAAAGATATAAATCTCAATTCTTAAAGATGTTGAACGTCATCTCAGAGAACTTTTTAGTTGATCTGAAATCACGGAATTTACCAGGAGTTCTGGAGATAGAGACTTACATACAAGGTCAGCAGTTCCTTCAAGAGCCAGAAGGAAGGAGCCTGCAGCCTAACTCGTTATCGAAAGAAAGGGATCCTTAA 1539 0.4353 MQMRQTSKDVMLGSIKVPAKTQLLLALIAVHHDRKIWGEDCHEFNPMRFNEPRKHLAALFPFGHTRKQRATHKTHKKKNDTASEEDKMQCTHGGARRIAAAATRRVEDSSNDTHGSAQRIAAASDTHDVTAARGGQQQRVVKLEPQRVHGIAIDPEPDWSFDARRKRYGNRIDRGKTFILSAHEYETEDSENEDHNDEKVLVEGGKRFICDLSDSDDYDVTSTFEVQSYLMWEVKEVEGGLFELMHEHQLKVKDEIRNKISVLETALPNEIQGSTSSLFRVEKYKETRQELDKKIDTQYQRWIYKTYDVVSDKMLDSKELARKSKASEFIKLLNDPQCPQSISIELFAKKVPHAMDILLAELHRACLYSVPKNMVDSEKMKSTEDCLQQLESYVKLYGALVQTEIPNIQNLHGLQEGWAWLARFLNALPANQYTAVSLKAFLQMVGFGLFKRYKSQFLKMLNVISENFLVDLKSRNLPGVLEIETYIQGQQFLQEPEGRSLQPNSLSKERDP* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02581 512 Gene3D Cytochrome P450 1 70 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g02581 512 Gene3D - 340 495 IPR038506 -
Rops3g02581 512 MobiDBLite consensus disorder prediction 66 138 - -
Rops3g02581 512 MobiDBLite consensus disorder prediction 77 92 - -
Rops3g02581 512 Pfam GLE1-like protein 342 464 IPR012476 GO:0005643|GO:0016973
Rops3g02581 512 Pfam Cytochrome P450 3 63 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g02581 512 Coils Coil 281 301 - -
Rops3g02581 512 SUPERFAMILY Cytochrome P450 2 64 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g02581 512 PANTHER GLE-1-RELATED 154 307 IPR012476 GO:0005643|GO:0016973
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02581 Rops-Chr3 54242144 54264813 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02581 4 63 Cytochrome P450 AT1G75130 51.667 9.59e-15 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02581 K18723 - gmx:100802744 256.529