Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02545 ATGGAGCTAAGCTTGGATTTGAGTTTGGCCTGTGTCCCCAAAACCGTTTCTTTGTTTCTTGGTGACATTTCTAGAAGCAAAGACATGTCTGAGAAACTGGCCTTGCTTGAGAAATTTGTGCAAATACTGGAGGATGAAATGAGAAAAGTAGAGGCCTTCAAACGCGAACTCCCTCTTTGCATGCTCCTCATAAACGATGCCATTACAAGATTCAAAGAAGAAAAAATCCGGTGTATGGGTATGCAAGATCCACCAGTGACTGAAGAATTGATGCCACTGAAAACCAATTATGGAGGAAATGGAAAAGGACACTTGACCATGGCAAAGGAAAGTGGTGACAAGAAGAATTGGATGAGTTCAGCTCAGCTATGGACCACTGAAACCAAATTGAGGAATGAAGAAGATGATAAGTCTGTGCCTGATCACCCAATTCAGCAACGGGATCAGAAGAACAATAGTGGAGGAACATTGATCGCATTTAATGGAAATCCGTGTGTACCCAAGCAAGTTTCTTCACCAGTTCCAAGCTTTAGTTTGATGAGTCCTGCATCTGAACTGAGTCATAGCAATTCCAAGAGTGGTTGTGGAGGTAGTAGTTCTGGCTCTTCTTTGCTCCGTGTTGAGATGCAGAGTCAACCACAACATCTGCAGCAGAATCCAAGGAAACAAAGGCGATACTGGTCACCGAAGCTTCATCGGCGTTTTGTTGACGCGCTTCAACAACTTGGTGGAGCACAAGATGATGCAGGGGGAAGTTTTCTATGCACAGATGTTGGAGTTTTCTATGCACCAGGTCATGTTTTAAGGGATGAGGTATTTGATGGTGCAGAAGCAGTGCGTCAAATGGCGAACTGGTTGATTGAAAATCATGGTTTTAGAATACTTTCATTCAACTCATGA 900 0.4333 MELSLDLSLACVPKTVSLFLGDISRSKDMSEKLALLEKFVQILEDEMRKVEAFKRELPLCMLLINDAITRFKEEKIRCMGMQDPPVTEELMPLKTNYGGNGKGHLTMAKESGDKKNWMSSAQLWTTETKLRNEEDDKSVPDHPIQQRDQKNNSGGTLIAFNGNPCVPKQVSSPVPSFSLMSPASELSHSNSKSGCGGSSSGSSLLRVEMQSQPQHLQQNPRKQRRYWSPKLHRRFVDALQQLGGAQDDAGGSFLCTDVGVFYAPGHVLRDEVFDGAEAVRQMANWLIENHGFRILSFNS* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02545 299 Gene3D - 221 279 - -
Rops3g02545 299 MobiDBLite consensus disorder prediction 97 117 - -
Rops3g02545 299 MobiDBLite consensus disorder prediction 129 164 - -
Rops3g02545 299 MobiDBLite consensus disorder prediction 145 164 - -
Rops3g02545 299 MobiDBLite consensus disorder prediction 176 203 - -
Rops3g02545 299 MobiDBLite consensus disorder prediction 129 144 - -
Rops3g02545 299 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 8 246 IPR044787 GO:0003700|GO:0006355
Rops3g02545 299 Coils Coil 36 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02545 Rops-Chr3 53309208 53312842 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02545 1 263 G2-like Transcription Factor Family AT4G37180 34.965 7.65e-39 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02545 - - pvu:PHAVU_002G021400g 266.159