Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02540 ATGCTAGTTTCGTGGATTTGGAACACTATCGAACCTAGCTTTCGTTCAACTGTGACATACATGGAGAATGCAAAGGATTTGTGGGAAGATGTCAAAGAAAGATTTTCAGTTGTGAATGGGTCGAGAATCCAGCAACTGAAGGCAGACCGGCAGGCTGCAAGCAACATGACTTCAAGTTGGGGATATAGTGAAATGCTGCATCCAGAAGATAACTTTGGAATTTTTGTTGAGGTTGTGAGCAAAACATCAAACATATATCCCAAAGATCCCAAATTCCCACCTAAAGGTGTGGAAGATATGACAAGGCTGGCATATCTGCATGAACAAGGGATATACACAGGAAACATATTGATAGTCATGAACCCTTTTCAAAGGTTACCTCATTTGTATGCTAACAGTATAAAGGTGCAGCTTTTGGTGAGCAGGACTCACATCCTTTTGCAATTGCAGGTTCTGCATATAGTGCAGTATCTTCTTGATGTATGTATTGAGAGCCTGGGAGAACTGATACAGTCAAATTTTGGCAAAGAGTCTTATAAGCTGTAA 546 0.4066 MLVSWIWNTIEPSFRSTVTYMENAKDLWEDVKERFSVVNGSRIQQLKADRQAASNMTSSWGYSEMLHPEDNFGIFVEVVSKTSNIYPKDPKFPPKGVEDMTRLAYLHEQGIYTGNILIVMNPFQRLPHLYANSIKVQLLVSRTHILLQLQVLHIVQYLLDVCIESLGELIQSNFGKESYKL* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02540 181 Gene3D Kinesin motor domain 67 157 IPR036961 -
Rops3g02540 181 PANTHER CCHC-TYPE DOMAIN-CONTAINING PROTEIN 1 84 - -
Rops3g02540 181 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 78 134 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02540 Rops-Chr3 53047848 53051714 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02540 78 132 Myosins gene family AT1G04600 55.714 9.24e-21 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02540 K10357 - lja:Lj1g3v0828100.1 91.2781