Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02530 ATGGCCATTGAAAAGCTTAGTTGTTGTGCAAAATTCCTTGAGAACTCTAAACCCTACTTTGCCATGATTTGTTTGCAATTTGGCTATGCTGGCATGAACATCATCACTAAGGTTTCCCTCAACCAAGGAATGAGCCATTATGTCCTTGTGGTTTATCGCCATGCCTTTGCAACTGCTTCCATTGCCCCATTTGCCTTTATTTTTGAAAGGAAAGGTCAACCAAAGATAACATTTCCTATTTTCATGCAAATTTTTATCCTAGCTCTCCTCGGGCCTGTGATTGATCAAAATTTCTACTATGCTGGGTTGAAGCTCACATCACCAACCTTCTCATGTGCATTGAGCAACATGCTTCCTGCCATGACTTTTGTCATGGCTATTTTATGCCGGATGGAGAAGATAAACATAAAGAAAGTGAGATGCCAAGCAAAGATACTAGGAACATTGGTGACAGTGGCAGGGGCAATGCTAATGACCTTATACAAAGGGCCTATTGTGGAGATGTTATGGGCCAAACATAGTCATACTGACAATAAGACCCATGCAACAAGCACCACAGGATCCTCAGACAAAGATTGGTTCTTAGGATGCATCTTTCTAATGATTGCCACCCTTGCTTGGGCTTCCCTATTTGTCTTACAAGCCAAAGCTATAGAAACGTACAAGAATCATCAGCTAAGCCTCACTTCACTTGTCTGCTTCATTGGCACTCTTCAAGCTGTTGCTGTTACTTTTGTGGCGGAGCACAATCCTTCTGTATGGAGAATTGGCTGGGATATGAACTTACTAGCTGCTGCATATGCTGGGATTGTGACTTCAAGCATATCATACTATGTCCAAGGGCTGGTGATTAAGAAGAAAGGGCCTGTCTTTGCAACTGCTTTTAGCCCTCTAATGATGATCATTGTTGCCATCATGGGTTCCTTTATCCTTGCAGAACAGATTTATCTTGGAGGTGTGATTGGTGCCATCTTGATTGTTTTTGGCTTATACTCTGTCCTATGGGGAAAGCACAAAGAACAAAGAGAGAATAAAGTAGCAGATGATATTCCCTTGCCTTTAAAGGATGCTCAAATGGCAGAAATTGCAAAGCCAGTGATTGATGCCACTGATTATTTCATTGAAGTAAAATCTGGTCAAAAAGAAGAAGCCAGCAACAAACGCTCTTCAGTTGTAATAAGCATGCCTATTAGAGAGCCTACAGAAACTAACCAAGAAGCAAAGGCTTAA 1230 0.4154 MAIEKLSCCAKFLENSKPYFAMICLQFGYAGMNIITKVSLNQGMSHYVLVVYRHAFATASIAPFAFIFERKGQPKITFPIFMQIFILALLGPVIDQNFYYAGLKLTSPTFSCALSNMLPAMTFVMAILCRMEKINIKKVRCQAKILGTLVTVAGAMLMTLYKGPIVEMLWAKHSHTDNKTHATSTTGSSDKDWFLGCIFLMIATLAWASLFVLQAKAIETYKNHQLSLTSLVCFIGTLQAVAVTFVAEHNPSVWRIGWDMNLLAAAYAGIVTSSISYYVQGLVIKKKGPVFATAFSPLMMIIVAIMGSFILAEQIYLGGVIGAILIVFGLYSVLWGKHKEQRENKVADDIPLPLKDAQMAEIAKPVIDATDYFIEVKSGQKEEASNKRSSVVISMPIREPTETNQEAKA* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02530 409 PANTHER WAT1-RELATED PROTEIN 18 344 IPR030184 GO:0016020|GO:0022857
Rops3g02530 409 MobiDBLite consensus disorder prediction 385 402 - -
Rops3g02530 409 MobiDBLite consensus disorder prediction 379 409 - -
Rops3g02530 409 Pfam EamA-like transporter family 18 159 IPR000620 GO:0016020
Rops3g02530 409 Pfam EamA-like transporter family 195 334 IPR000620 GO:0016020
Rops3g02530 409 SUPERFAMILY Multidrug resistance efflux transporter EmrE 251 340 - -
Rops3g02530 409 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02530 Rops-Chr3 52410936 52414031 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02530 1 399 Nodulin-like Gene Family AT5G07050 67.892 0.0 544
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02530 - - gmx:100804390 689.108