Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02525 ATGGCTAAGAAGCAGCTACTGAAATTCAATTTCTTGTGTCTCAATCTGCTGAAGCAAATTACTGAAGCTGTACCTGAACCTACTAAGGATCAGAAGAAAAAGGAAGAAGTTGTTGTTGCAGCTAAGTTTGGCTATGCTGGCATGATCATTATTGCTAAGCTTTCTCTCAACCAAGGCATGAGTCACTATGTCTTTGTGGTTTATCGTCATGCCTTAGCAACTGTTTGCATCACTCCATTTGCCTTCATTTTTGAAAGGAAAGGTCAACCAAAGATAACATTCCCAGTTTTCAAGCAAATTTTCATCCTAGCTCTACTCGGGCCTGTGCTTGATCAAAATTTCTACTTTGCTGGGTTGAAGCTCACATCTTCAACCTTCTCTTGTGCAATGAGCAACATGCTTCCAGCCATGACTTTTGTCATGGCAATTTTATGCCGGATGGAGAAGATAAACATAAAGAAAGTGAGATGCCAAGCAAAGATAGTGGGAACATTAGTGACAGTGGCTGGGGCAATGCTAATGGCCTTATACAAAGGACCTCTTGTGGAGATAATATGGGCCAAACATGGCCATCCTTATCAAAAGACCTATGAAACAAGCACCATAGAATCCTCAGGAAAATATTGGTTCTTAGGCTGCATCTTCCTTATCATTTCCACTCTTGCCTGGGCTTCCGTCTTTGTTTTGCAAGCCAAAGCTATAAAGACATACAAGAACCATCAGCTAAGCCTCACTTCACTTGTTTGCTTCATAGGCACTCTTCAATCTGCTTTTGTTGCTTTAGTTGCGGAGCACAATCTTTCTGTATGGAAAATTGGCTGGGATATGAACTTACTAGCTGCTGCCTATGGTGGACTTGTGACTTCCAGCATATCATATTATGTACAAGGACTAGTGATCAAGAAGAAAGGGCCTGTCTTTGCAACTTCCTTTAGTCCCTTAATGATGATCACTGTTGCCATCATGGGTTCCTTTATTCTTAAAGAACAGATTTATCTTGGAGGTGTGATTGGTGCCATCTTGATTGTTATTGGCTTATACTCTGTTCTTTGGGGAAAGCACAAAGAACAAAGAGAGAATAAAGCAGCAGATGATATTCCCTTGCCTTTAAAGGATGCTCAAATGGCTGAAATTGCAAAGCCAGTGATTGAAGCCACTGATTATTTCACTGAAGTAAAATCTGGTCAAAAAGAAGAAGCTAGCAACAAGCTCTCTTCAGTTGTAATAAGCATGCCTATTATAGAGTCTACAAAAGTTAACCAAGCAAAGGCTTAA 1275 0.4039 MAKKQLLKFNFLCLNLLKQITEAVPEPTKDQKKKEEVVVAAKFGYAGMIIIAKLSLNQGMSHYVFVVYRHALATVCITPFAFIFERKGQPKITFPVFKQIFILALLGPVLDQNFYFAGLKLTSSTFSCAMSNMLPAMTFVMAILCRMEKINIKKVRCQAKIVGTLVTVAGAMLMALYKGPLVEIIWAKHGHPYQKTYETSTIESSGKYWFLGCIFLIISTLAWASVFVLQAKAIKTYKNHQLSLTSLVCFIGTLQSAFVALVAEHNLSVWKIGWDMNLLAAAYGGLVTSSISYYVQGLVIKKKGPVFATSFSPLMMITVAIMGSFILKEQIYLGGVIGAILIVIGLYSVLWGKHKEQRENKAADDIPLPLKDAQMAEIAKPVIEATDYFTEVKSGQKEEASNKLSSVVISMPIIESTKVNQAKA* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02525 424 SUPERFAMILY Multidrug resistance efflux transporter EmrE 271 356 - -
Rops3g02525 424 SUPERFAMILY Multidrug resistance efflux transporter EmrE 68 178 - -
Rops3g02525 424 PANTHER WAT1-RELATED PROTEIN 37 361 IPR030184 GO:0016020|GO:0022857
Rops3g02525 424 Pfam EamA-like transporter family 211 350 IPR000620 GO:0016020
Rops3g02525 424 Pfam EamA-like transporter family 38 174 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02525 Rops-Chr3 52200268 52214815 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02525 38 416 Nodulin-like Gene Family AT5G07050 60.052 1.19e-162 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02525 - - gmx:100804233 589.726