Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02516 ATGGAGGGAACACAACTCCATGTGAGATCCATATCCTTTGTTTTCCTGCTATTGCTGAGCTTCAAACCACTCATTACAAAGGCACAATCCCCCAATTACGTTGAAGATTTCTGTCATAACACCCCCCAGAAAGTTCTTAGCAGTGCATACAAAACCAATCTTAATAGCATTCTCTCTTGGTTATCCTCTGATGCAGCCACAAGCAAAGGTTATAACCACACCAGCATAGGCAACACCACCTCAGGAGATGCAGTGTATGGCCTCTATGATTGCCGTGGTGATGTGGTTGGATACTTTTGTCAATTTTGTGTCTCTACTGCTGCAAGAGATGTTCTTCAGCGCTGTCCCAATCCCAATAGAGTCTCTGCTGTCATATGGTATGATTTCTGCATTCTCAGGTACTCAAATGAGAACTTCTTTGGGAAAGTTACAACAGATCCTTCATGGCATAATATCGGAACAAAAAACATCCCCAGTGCAACAGAGTTTCAGAAAGTTCTACTTACTAAGAGAAGGTATGGCATGGTGCAATGCAGCAGAGATCTTACAAATGAGGGGTGCAGACAGTGTTTGGAGGCCATGTTAGCACAAGTTCCCAAATGTTGTGCACAAAAGATGGGGTGGCTGGTTGGGTCTTCAAGTTGTCTGATGAAGTATGATGACTATATGTTCTACCTTTTTCGCAATCAAACATCTTCAGTTCCTGTGCCTGATCTGCAAACAGCCAGACAAGAGGGTACTAGTAAGTCAAGAAACTTGATCATTGGCTTAAGTGTGCCAGGGTCAGTAGCTCTACTATGTTTCAGTGTCTACTGCTTTTGGAGCAGGAAACGAGTTAGAAAAGATGGGCTGATACTTGATACTCTTCCTCCTCTATCTTCAAATGAGGAAACATTGAATGCAGACCTGCCTACAATCCCACTAATAACAATTTTTCATAGTACTAATAATTTTTCAGAAGCATCTAAATTAGGGGAAGTCAAAAGGCTCTCAAAAGCTTCTGGTCAAGGCCCTGAGGAGTTCAAGAATGAATTAATGTTTATAGCTAAACTGCAACATCGCAACCTTGTAAGACTTTTGGGATGCTGTTTGGAGAAAAATGAAAAGATACTAGTGTATGAGTATTTGTCAAACGCAAGTCTCGACTTTCACCTGTTTGATGATGAAAAACGAAAGCAACTCAATTGGAAACTAAGATTAAGCATTATCAATGGAATAGCAAGAGATATTTTATACCTTCATGAGGACTCTCGACTCAAAGTAATCCACAGAGATCTCAAAGCTAGCAATGTTCTATTAGACAATGAGATGAATCCCAAAATATCCGATTTTGGATTGGCAAGAGCATTTGAAAGAGGCCAGAATCAAGCAAATACAAATCGAGTAATGGGTACCTACGGATACATGGCTCCAGAATATGCTATGGAAGGATTATTTTCAGTCAAATCTGATGTCTTCAGCTTTGGAGTACTTGTTTTAGAAATCATTTGTGGGAAAAAGAACAGTGGATTCTATCTGTCAGAACATGGTCTAAGTCTTCTTTTATATACATGGAAAAAATGGTGTGAAGGAAAATGTTTGGAATTGATGGATTCAGTGCTGGAAGAAACCTGCAAAGCCAGTGAAGTTGTGAAGTGCATACACATTGGGTTGTTGTGTGTTCAAGAAGATGCAGCAGAAAGACCAACCATGTCAACTGTTGTTGTAATGCTGGCGAGTGACACAATGGCCCTTCCAAGACCCAAAGCCCCAGCATTTTCAGTTGGAAGAATGACTTTAGAGGAAGCATCTACTTCGAAAAGTTCCAAGAATCTTTCTAATAATGATGTAACAGTCTCTAGTATTTTACCTAGGTAA 1857 0.4028 MEGTQLHVRSISFVFLLLLSFKPLITKAQSPNYVEDFCHNTPQKVLSSAYKTNLNSILSWLSSDAATSKGYNHTSIGNTTSGDAVYGLYDCRGDVVGYFCQFCVSTAARDVLQRCPNPNRVSAVIWYDFCILRYSNENFFGKVTTDPSWHNIGTKNIPSATEFQKVLLTKRRYGMVQCSRDLTNEGCRQCLEAMLAQVPKCCAQKMGWLVGSSSCLMKYDDYMFYLFRNQTSSVPVPDLQTARQEGTSKSRNLIIGLSVPGSVALLCFSVYCFWSRKRVRKDGLILDTLPPLSSNEETLNADLPTIPLITIFHSTNNFSEASKLGEVKRLSKASGQGPEEFKNELMFIAKLQHRNLVRLLGCCLEKNEKILVYEYLSNASLDFHLFDDEKRKQLNWKLRLSIINGIARDILYLHEDSRLKVIHRDLKASNVLLDNEMNPKISDFGLARAFERGQNQANTNRVMGTYGYMAPEYAMEGLFSVKSDVFSFGVLVLEIICGKKNSGFYLSEHGLSLLLYTWKKWCEGKCLELMDSVLEETCKASEVVKCIHIGLLCVQEDAAERPTMSTVVVMLASDTMALPRPKAPAFSVGRMTLEEASTSKSSKNLSNNDVTVSSILPR* 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02516 618 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 48 614 - -
Rops3g02516 618 MobiDBLite consensus disorder prediction 597 618 - -
Rops3g02516 618 FunFam Cysteine-rich receptor-like protein kinase 28 34 138 - -
Rops3g02516 618 Gene3D Transferase(Phosphotransferase) domain 1 376 578 - -
Rops3g02516 618 Gene3D Phosphorylase Kinase; domain 1 326 375 - -
Rops3g02516 618 SMART serkin_6 318 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g02516 618 ProSiteProfiles Protein kinase domain profile. 297 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g02516 618 FunFam cysteine-rich receptor-like protein kinase 10 376 578 - -
Rops3g02516 618 Gene3D - 32 139 IPR038408 -
Rops3g02516 618 Gene3D - 149 224 IPR038408 -
Rops3g02516 618 SUPERFAMILY Protein kinase-like (PK-like) 305 598 IPR011009 -
Rops3g02516 618 ProSitePatterns Serine/Threonine protein kinases active-site signature. 421 433 IPR008271 GO:0004672|GO:0006468
Rops3g02516 618 ProSiteProfiles Gnk2-homologous domain profile. 32 139 IPR002902 -
Rops3g02516 618 Pfam Domain of unknown function (DUF3403) 573 618 IPR021820 GO:0004674
Rops3g02516 618 Pfam Salt stress response/antifungal 43 136 IPR002902 -
Rops3g02516 618 Pfam Salt stress response/antifungal 169 222 IPR002902 -
Rops3g02516 618 Pfam Protein tyrosine and serine/threonine kinase 327 570 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02516 Rops-Chr3 52066516 52070179 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02516 14 618 Receptor kinase-like Gene Family AT4G05200 41.593 1.67e-166 490
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops3g02516 PK_Tyr_Ser-Thr 6.1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02516 - - gmx:100796972 924.85