Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02515 ATGATCGCTTCTCATGGTGTTGAACGGATTCCAACTCCTAAGCCACTAGTTAACAAAACCATGATACTAAAACTCCTCAAGGACGCTTCTGAATCTTCTCAGTTGCAGATCCAATGCCTCCAAAGACTCAAATCCATCGTTTCTGAGAGTGAGACAAATAGACGCTGCATGGAAGCTTCTGGTGCTGTTGAATTTTTAGCATCAGTTGTAACCAGCAACACCAAAGCTTCACTTTCCGCATATGATGATGATATTGATGGGTTTGACTTGAAAACAAGTGCAGGAGATGAAGCTTTAAGCATCCTCTTTAGTCTCTATTTATCAAAAGAGGGTCTCAAGACTCTCCTGGCTTTCAAAAATGGAGAATTTATGGATTCCTTGATGAGAATCATGCAAAGGGGAAGTTCCAAGCTTTCAGATGGATGA 426 0.4108 MIASHGVERIPTPKPLVNKTMILKLLKDASESSQLQIQCLQRLKSIVSESETNRRCMEASGAVEFLASVVTSNTKASLSAYDDDIDGFDLKTSAGDEALSILFSLYLSKEGLKTLLAFKNGEFMDSLMRIMQRGSSKLSDG* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02515 141 PANTHER WDSAM1 PROTEIN 3 136 IPR045185 GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02515 Rops-Chr3 52016892 52017317 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02515 3 134 U-box Gene Family AT3G52450 42.177 1.08e-28 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02515 - - gmx:100811258 167.162