Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02514 ATGGAGGGAACACAAATCAATGTGAGATCAATATCCTTTGCTTTCCTGCTATTGCTGAGCTTCAAATCACTCATTACAAAAGCACAAGCCCCCTTCTACTTGGGAGATGATTGTCATGATACCACCCCAAAAGCTCTTAGCAGTTCATACAAAACCAATCTTAACAGCGTCCTCTCATGGCTTTCCACTGATGCAGCCACAAGCAAAGGTTATAACCACACCAGCATAGGTAACAAAACCTCAGGAGATGCTGTGTATGGCCTCTATGATTGCCGTGGTGATGTGGTTGGATACTTCTGTCAATTCTGTGTCTCTACTGCTGCCAGAGAATATCTTCAGCACTGCAGCAACAGAGTCTCTGCTGTCATACGGTATAATTTCTGCATTCTAAGGTACTCAAATGAGAACTTCTTTGGGAAAGTTACAATAGACCCATCATGGCATAATGTCGGAACAAAAAACATCTCCAGTGCAATAGAGATTCAGAAAGGTGAGGATTTTATGAGCAATTTGATCAGAAAAGCAACTAAGGAGACCAACCAGTTGTTCTATGTGGGTGAGTTCAATTTGAGTTCTGCTAAGAGAAGGTATGGCCTGGTGCAATGCACCAGAGATCTTACAAATGAGGGGTGCAGACAGTGTTTGGAGGCCATGTTAGCACAAGTTCCTAAATGTTGTGCACAAAAGTTGGGATGGCTGGTTGGGTCTTCAAGTTGTCTAATGAAGTATGATGATTCTATGTTCTTCCCTTCTCCAAATCAAGCATCTTCAGTTCCTGTGCCTAATCTGCAAACAGCTAGACAAGGGGGTAGTAGTAAGTCGAGAAACTTGATCATCAGCTTAAGTGTGCTGGGGTCAGTAGCTGTAGCTGTACTATGTTTCAGTGTATACTGCTTCTGGGGCAGAAAAAGATTCAGAAAAGATGGGCTGATACTTGATACCATTCCACTATCTTCAAATGAGGAAACATTGAATGCAGACCTGCCGACAATCCCATTAATCACAATTCTTCATAGTACTAATAACTTTTCAGAAGCATCTAAATTAGGGCAAGGTGGATTTGGCCCCGTTTACAAGGGAATTCTACCAGATGGAAGACAAATTGCAGTCAAAAGGCTCTCAAAAGCTTCTGGTCAAGGCTCGGAGGAGTTCAAGAATGAAGTAATGTTTATAGCTAAATTGCAGCATCGCAACCTTGTAAGACTTTTGGCATGCTGCTTGGAGGAAAATGAAAAGATACTTGTATATGAGTACATGTTGAATGCAAGTCTCGACTTTCACCTGTTTGATGATGAAAAAAGAAAGCAACTCAATTGGAAACTAAGATTAAGCATTATCAATGGAATAGCAAGAGGTATTTTATACCTCCATGAGGACTCTCGACTCAGAGTAATTCATAGAGATCTCAAAGCTAGCAATGTTCTATTAGACAATGAGATGAATCCCAAAATATCTGATTTTGGATTGGCAAGAGCATTTGCAACAGGTCAGAATCAGGCAAATACAAATCGAGTCATGGGTACCTATGGATACATGGCTCCAGAATATGCTATGGAAGGATTATTTTCAGTCAAATATGATGTTTTCAGCTTTGGAGTACTTGTTTTAGAAATCATTTGTGGGAAAAAGAATAGTGGATTCTATCTGTCAGAACATGGTCAAAGTCTTCTTTTATTCACATGGAAAAAGTGGTGTGAAGGAAAATGTTTGGAATTGATGGATTCAGTTTTGGAAGAATCCTGCATAGCCAGTGAAGTTGTGAAGTGCATACACATTGGTCTATTGTGTGTTCAAGAAGATGCAGCAGATAGACCAACCATGTCCACTGTTGTTGTAATGCTGGCAAGTGACACAATGGCCCTTCCAAAACCAAAAGCACCAGCATTTTCAGTTGGAAGAATGACTTTAGAGGAAGCATCTACTTCAAAAAGTTCCAAGAATCTTTCTACTAATGATGTAACAGTCTCTAGCATTTCACCAAGGTAA 1986 0.4033 MEGTQINVRSISFAFLLLLSFKSLITKAQAPFYLGDDCHDTTPKALSSSYKTNLNSVLSWLSTDAATSKGYNHTSIGNKTSGDAVYGLYDCRGDVVGYFCQFCVSTAAREYLQHCSNRVSAVIRYNFCILRYSNENFFGKVTIDPSWHNVGTKNISSAIEIQKGEDFMSNLIRKATKETNQLFYVGEFNLSSAKRRYGLVQCTRDLTNEGCRQCLEAMLAQVPKCCAQKLGWLVGSSSCLMKYDDSMFFPSPNQASSVPVPNLQTARQGGSSKSRNLIISLSVLGSVAVAVLCFSVYCFWGRKRFRKDGLILDTIPLSSNEETLNADLPTIPLITILHSTNNFSEASKLGQGGFGPVYKGILPDGRQIAVKRLSKASGQGSEEFKNEVMFIAKLQHRNLVRLLACCLEENEKILVYEYMLNASLDFHLFDDEKRKQLNWKLRLSIINGIARGILYLHEDSRLRVIHRDLKASNVLLDNEMNPKISDFGLARAFATGQNQANTNRVMGTYGYMAPEYAMEGLFSVKYDVFSFGVLVLEIICGKKNSGFYLSEHGQSLLLFTWKKWCEGKCLELMDSVLEESCIASEVVKCIHIGLLCVQEDAADRPTMSTVVVMLASDTMALPKPKAPAFSVGRMTLEEASTSKSSKNLSTNDVTVSSISPR* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02514 661 SMART serkin_6 343 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g02514 661 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 312 418 - -
Rops3g02514 661 ProSiteProfiles Protein kinase domain profile. 343 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g02514 661 CDD STKc_IRAK 349 614 - -
Rops3g02514 661 ProSiteProfiles Gnk2-homologous domain profile. 32 137 IPR002902 -
Rops3g02514 661 Pfam Protein tyrosine and serine/threonine kinase 347 613 IPR001245 GO:0004672|GO:0006468
Rops3g02514 661 FunFam Cysteine-rich receptor-like protein kinase 28 34 136 - -
Rops3g02514 661 ProSiteProfiles Gnk2-homologous domain profile. 143 248 IPR002902 -
Rops3g02514 661 Pfam Domain of unknown function (DUF3403) 616 661 IPR021820 GO:0004674
Rops3g02514 661 FunFam Cysteine-rich receptor-like protein kinase 10 146 248 - -
Rops3g02514 661 ProSitePatterns Serine/Threonine protein kinases active-site signature. 464 476 IPR008271 GO:0004672|GO:0006468
Rops3g02514 661 Pfam Salt stress response/antifungal 45 134 IPR002902 -
Rops3g02514 661 Pfam Salt stress response/antifungal 166 245 IPR002902 -
Rops3g02514 661 Gene3D Transferase(Phosphotransferase) domain 1 419 623 - -
Rops3g02514 661 FunFam Liguleless narrow1 419 622 - -
Rops3g02514 661 Gene3D - 34 137 IPR038408 -
Rops3g02514 661 Gene3D - 147 248 IPR038408 -
Rops3g02514 661 MobiDBLite consensus disorder prediction 639 661 - -
Rops3g02514 661 SUPERFAMILY Protein kinase-like (PK-like) 329 642 IPR011009 -
Rops3g02514 661 Gene3D Phosphorylase Kinase; domain 1 314 418 - -
Rops3g02514 661 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 27 660 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02514 Rops-Chr3 52008655 52013298 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02514 13 661 Receptor kinase-like Gene Family AT4G05200 42.942 6.38e-179 523
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops3g02514 PK_Tyr_Ser-Thr 1.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02514 - - gmx:100795922 1019.22