Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02513 ATGGAGGGAACACAAATCAATGTGAGATCAATATCCTTTGCTTTCCTGCTATTGCTAAGCTTCGAACCACTCATTACAAAAGCACAATCCCCCATCTACTTGGGAGATGATTGTCATCACAGCACCCCAAAAGCTCTCAGCACTGCATACAAAACCAATCTTAACAGCATCCTCTCATGGCTATCCTCTGATTCAGCCGTTAGCAAAGGTTATAACCACACCAGCATAGGCAACAAAACCTCAGGAGATGCTGTATATGGCCTCTATGATTGTCGTGGTGATGTCGTTGGATACTTTTGTCAATTCTGTGTCTCTACTGCTACCAGAGATTATCTTCAGCGCTGCCCCAATAGAAGTTCTGCTGTTATACGGTATAATTTCTGCTTTCTCAGGTACTCAAATGAGAACTTCTTTGGGGAAGTTACTATAAACCCTTCATGGCCTATTTTTGGAACAAAAAACATCTCCAGTGCAACAGAGATTCAGAAAGGTGAGGATTTTATGAGAAGTTTGATCAGTAAAGCAACTAAGGAGACCAACCAATTGTTCTATATGGGTGAGTTAAATTTGAGTTCTACTAAGAGAAGGTATGGCATGGTGCAATGCACCAGAGATCTTACAAATGAGGGGTGCAGACAGTGTTTGGAGGCCATGTTAGCACAAGTTCCTAAATGTTGTGCACATAAGATGGGGTGGCAGGTTGGGGCTCAGAGTTGTCTGATAAAGTATGATGATTATATGTTCTACCTTTCTCCAAATCAAGCATCTTCAGTTCCTGTGCCTAATCTGCAAACAGCCAGACAAGGGAGTACTGGTAAGTCAAGAAAATTGATCATTGGCTTAAGTGTGCCGGGGTCAGTAGCTCTACTATGTTTCAGTGTCTACTGCTTCTGGAGCAGGAATAGAGTTAGAAAAGATGGGATACTTGATACCATTCCTCTGTCTCCAAATGAGGAAGCACTGAATGCAGACCTGCCGACAATCTCATTAATCACAATTCTTCATTGTACTAATAACTTTTCAGACGCATCTAAATTAGGGGAAGGTGGATTTGGCCCCGTTTACAAGGGAATTCTACCAGACGGAAGACAAATTGCAGTCAAAAGGCTGTCAAAAGCTTCAGGTCAAGGTTCGGCGGAGTTCAAGAATGAAGTAATGTTTATAGCTAAATTGCAACATCGCAACCTTGTAAGACTTTTGGCATGCTGCTTGGAGGAAAATGAAAAGATACTGGTATATGAGTACATGTTGAATGCAAGTCTCGACTTTCACCTGTTTGATGATGAAAAAAGAAAGCAACTCAATTGGAAACTAAGATTTAGCATTATCAACGGAATAGCAAGAGGTATGTTATACCTTCATGAGGACTCTCGACTCAGAGTAATTCATAGAGATCTCAAAGCTAGTAATGTTCTATTAGACAATGAGATGAATCCCAAAATATCCGATTTTGGATTGGCAAGAGCATTTGCAACAGGTCAGAATCAGGCAAATACAAATCGAGTCATGGGTACCTATGGATACATGGCCCCAGAATATGCTATGGAAGGATTATTTTCAGTCAAATCTGATGTTTTCAGCTTTGGAGTACTTGTTTTAGAAATCATTTGTGGGAAAAAGAATAGTGGATTCTATCTGTCAGAACATGGTCTAACTCTTCTTTTATTTACATGGAAAAAGTGGTGTGAAGGAAAATGTTTGGAATTGATGGATTCAGTTTTGGAAGAATCCTGCATAGCCAGTGAAGTTGTGAAGTGCATACACATTGGTCTATTGTGTGTTCAAGAAGATGCAGCAGATAGACCAACCATGTCCACTGTTGTTGTAATGCTGGCAAATGACACAATGGCCCTTCCAAAACCTAAAGCACCAGCATTTTCAGTTGGAAGAATGACTTTAGAGGAAGCATCTACTTCAAAAAGTTCCAAGAATCTTTCTATTAATGATGTAACAGTCTCTAGCATTTCACCAAGGTAA 1977 0.4026 MEGTQINVRSISFAFLLLLSFEPLITKAQSPIYLGDDCHHSTPKALSTAYKTNLNSILSWLSSDSAVSKGYNHTSIGNKTSGDAVYGLYDCRGDVVGYFCQFCVSTATRDYLQRCPNRSSAVIRYNFCFLRYSNENFFGEVTINPSWPIFGTKNISSATEIQKGEDFMRSLISKATKETNQLFYMGELNLSSTKRRYGMVQCTRDLTNEGCRQCLEAMLAQVPKCCAHKMGWQVGAQSCLIKYDDYMFYLSPNQASSVPVPNLQTARQGSTGKSRKLIIGLSVPGSVALLCFSVYCFWSRNRVRKDGILDTIPLSPNEEALNADLPTISLITILHCTNNFSDASKLGEGGFGPVYKGILPDGRQIAVKRLSKASGQGSAEFKNEVMFIAKLQHRNLVRLLACCLEENEKILVYEYMLNASLDFHLFDDEKRKQLNWKLRFSIINGIARGMLYLHEDSRLRVIHRDLKASNVLLDNEMNPKISDFGLARAFATGQNQANTNRVMGTYGYMAPEYAMEGLFSVKSDVFSFGVLVLEIICGKKNSGFYLSEHGLTLLLFTWKKWCEGKCLELMDSVLEESCIASEVVKCIHIGLLCVQEDAADRPTMSTVVVMLANDTMALPKPKAPAFSVGRMTLEEASTSKSSKNLSINDVTVSSISPR* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02513 658 CDD STKc_IRAK 346 611 - -
Rops3g02513 658 FunFam cysteine-rich receptor-like protein kinase 10 416 618 - -
Rops3g02513 658 FunFam Cysteine-rich receptor-like protein kinase 10 146 248 - -
Rops3g02513 658 FunFam Cysteine-rich receptor-like protein kinase 28 34 136 - -
Rops3g02513 658 Gene3D Transferase(Phosphotransferase) domain 1 416 620 - -
Rops3g02513 658 ProSiteProfiles Protein kinase domain profile. 340 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g02513 658 ProSiteProfiles Gnk2-homologous domain profile. 32 137 IPR002902 -
Rops3g02513 658 Pfam Domain of unknown function (DUF3403) 613 658 IPR021820 GO:0004674
Rops3g02513 658 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 310 415 - -
Rops3g02513 658 Gene3D - 34 137 IPR038408 -
Rops3g02513 658 Gene3D - 148 248 IPR038408 -
Rops3g02513 658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
Rops3g02513 658 SUPERFAMILY Protein kinase-like (PK-like) 326 638 IPR011009 -
Rops3g02513 658 Pfam Protein tyrosine and serine/threonine kinase 344 610 IPR001245 GO:0004672|GO:0006468
Rops3g02513 658 SMART serkin_6 340 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g02513 658 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 34 657 - -
Rops3g02513 658 ProSiteProfiles Gnk2-homologous domain profile. 143 248 IPR002902 -
Rops3g02513 658 Pfam Salt stress response/antifungal 165 246 IPR002902 -
Rops3g02513 658 Pfam Salt stress response/antifungal 45 134 IPR002902 -
Rops3g02513 658 Gene3D Phosphorylase Kinase; domain 1 313 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02513 Rops-Chr3 51980453 51983734 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02513 12 658 Receptor kinase-like Gene Family AT4G05200 42.899 1.36e-180 527
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops3g02513 PK_Tyr_Ser-Thr 3.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02513 - - gmx:100795922 1000.73