Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02512 ATGGAGGGAATACAAAACTTGAGATCAATGTCCTATGCTTTCTTGCTATTATTGCTGAGCTTCAGACCACTCATTACAAAGGCACAATCCCCCAATTACGTGGGGGATTTCTGTCATAACACTCCCCAAACAGCTCTCAGCAGTGCATACAAAACCAATCTTAACAGCGTCCTCTCATGGCTATCCTCTGATTCAGCCACAAGCAAAGGTTATAACCGCACCAGCATAGGTAACAACACCTCAGGAGATGCAGTGTATGGCCTCTATGATTGCCGTGGTGATGTGGTTGGATACTTCTGTCAATTCTGTGTCTCTACTGCTGCAAGAGATGTTCTTCAGCGCTGCCCCAATAGAGTTTCTGCTTCCATATGGTATGATTTCTGCGTTCTCAGATACTCAAATGAGAACTTCTTTGGGAAAGTTACAATAGATCCTTCATGGCATAATGTCGGAACAAAAAACATCTCCAGTGCAATAGAGATTCAGAAAGGTGAGGATTTTATGAGAAGTTTGATCAGAAGAGCAACAACTAAGGGAACCAACAGGTTGTTCTATACAGGTGAGTTCAATTTGAGTTCTACTGAGAGAAGGTATGGCCTGGTGCAATGCACCATGGATGTTACAAATGAGGGGTGTAAACAGTGTTTGGAGGCCATGTTAGCACAAGTTCCCAAATGTTGTGCACAAAAGATGGGGTGGCTGGATGGGTCTTCAAGTTGTCTGATGAAGTATGATGACTATATGTTCTACCTTTTGCCAAATCAAACATCTTCAGTTCCTGTGCCTGATCTGCAAACAGCCAGACAAGGGGGTACTAGTAAGTCAAGAAACTTGATCGTTGGCTTAAGTTTGCCGGGGTCTGTAGCTCTACTATGTTTCAGTGTTTACTGCTTCTGGCGCAGGAATAGAGTTCGAAAAGATGGGCTAATACTTGATACCATTCCTCTATCTCCAAACGAAGAAACACTGAATGCAGACCTGCCTACAATCCCATTAATCACAATTCTTCATAGTACTGATAACTTTTCATTAGCATCTAAGTTAGGGGAAGGTGGATTTGGCCCTGTTTACAAGGGAACTCTACCTGATGGAAGACAAATTGCAGTTAAAAGGCTCTCTAAAGCTTCAGGTCAAGGCTCGGAGGAGTTCAAGAATGAAGTAATGTTTATAGCTAAATTGCAACATCGCAACCTTGTCAGACTTTTAGGATGCTGCTTGGAGAAAAATGAAAAGATACTTGTATATGAGTATATGTCAAATGCAAGTCTCGACTTTCACCTGTTTGATAAAGAAAAGAGAAAGCAACTTGATTGGAAACTAAGATTAAGCATTATCAATGGAATAGCAAGAGGTCTTTTATACCTTCATGAGGACTCACGACTGAAAATAATTCACAGAGATCTCAAAGCTAGCAATGTTCTATTGGACAATGAGATGAATCCCAAAATATCCGATTTTGGATTGGCAAGAGCTTTTGCAACAGGCCAGAATCAGGCAAATACAAATCGAGTAATGGGTACCTATGGATACATGGCTCCAGAATATGCAATGGAAGGATTATTTTCAGTCAAGTCTGATGTTTTCAGCTTTGGAGTACTTGTTTTAGAAATCATTTGTGGGAAAAAGAATAGTGGATTCTATCTGTCAGAACATGGTCAAAGTCTTATTTTATTTACATGGAAAAAGTGGTGTGAAGGAAAATGTTTGGAATTGATGGATTCAGTTTTGGAAGAAACCTGCATAGCCAATGAAGTTGTGAAGTGTATACACATTGGTCTATTGTGTGTTCAAGAAGATGCAGCAGATAGACCAACCATGTCAACTGTTGTTGTTATGCTGGCAAGTGACACAATGGCACTTCCAAAAGCAAAACCACCAGCATTTTCAGTTGGAAGAATGACTTTAGAGGAAGCATCTACTTCGAAAAGTTCCAAGAATCCTTCTATTAATATTGTAACAGTCTCTAACATTTCACCAAGGTAA 1983 0.4029 MEGIQNLRSMSYAFLLLLLSFRPLITKAQSPNYVGDFCHNTPQTALSSAYKTNLNSVLSWLSSDSATSKGYNRTSIGNNTSGDAVYGLYDCRGDVVGYFCQFCVSTAARDVLQRCPNRVSASIWYDFCVLRYSNENFFGKVTIDPSWHNVGTKNISSAIEIQKGEDFMRSLIRRATTKGTNRLFYTGEFNLSSTERRYGLVQCTMDVTNEGCKQCLEAMLAQVPKCCAQKMGWLDGSSSCLMKYDDYMFYLLPNQTSSVPVPDLQTARQGGTSKSRNLIVGLSLPGSVALLCFSVYCFWRRNRVRKDGLILDTIPLSPNEETLNADLPTIPLITILHSTDNFSLASKLGEGGFGPVYKGTLPDGRQIAVKRLSKASGQGSEEFKNEVMFIAKLQHRNLVRLLGCCLEKNEKILVYEYMSNASLDFHLFDKEKRKQLDWKLRLSIINGIARGLLYLHEDSRLKIIHRDLKASNVLLDNEMNPKISDFGLARAFATGQNQANTNRVMGTYGYMAPEYAMEGLFSVKSDVFSFGVLVLEIICGKKNSGFYLSEHGQSLILFTWKKWCEGKCLELMDSVLEETCIANEVVKCIHIGLLCVQEDAADRPTMSTVVVMLASDTMALPKAKPPAFSVGRMTLEEASTSKSSKNPSINIVTVSNISPR* 661
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02512 660 Gene3D - 147 249 IPR038408 -
Rops3g02512 660 Gene3D - 32 137 IPR038408 -
Rops3g02512 660 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 46 659 - -
Rops3g02512 660 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 312 417 - -
Rops3g02512 660 ProSiteProfiles Gnk2-homologous domain profile. 32 137 IPR002902 -
Rops3g02512 660 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Rops3g02512 660 SMART serkin_6 342 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g02512 660 ProSiteProfiles Protein kinase domain profile. 342 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g02512 660 Pfam Domain of unknown function (DUF3403) 615 660 IPR021820 GO:0004674
Rops3g02512 660 FunFam Liguleless narrow1 418 621 - -
Rops3g02512 660 CDD STKc_IRAK 348 613 - -
Rops3g02512 660 ProSiteProfiles Gnk2-homologous domain profile. 143 249 IPR002902 -
Rops3g02512 660 FunFam Cysteine-rich receptor-like protein kinase 28 34 136 - -
Rops3g02512 660 Pfam Salt stress response/antifungal 166 247 IPR002902 -
Rops3g02512 660 Pfam Salt stress response/antifungal 38 134 IPR002902 -
Rops3g02512 660 Gene3D Phosphorylase Kinase; domain 1 315 417 - -
Rops3g02512 660 Pfam Protein tyrosine and serine/threonine kinase 344 612 IPR001245 GO:0004672|GO:0006468
Rops3g02512 660 SUPERFAMILY Protein kinase-like (PK-like) 328 645 IPR011009 -
Rops3g02512 660 Gene3D Transferase(Phosphotransferase) domain 1 418 623 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Rops3g02512 Rops-Chr3 51870755 51876293 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02512 15 647 Receptor kinase-like Gene Family AT4G05200 44.444 0.0 533
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops3g02512 PK_Tyr_Ser-Thr 3.4e-50 CL0016
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02512 - - gmx:100795922 1022.69