Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops3g02512 | ATGGAGGGAATACAAAACTTGAGATCAATGTCCTATGCTTTCTTGCTATTATTGCTGAGCTTCAGACCACTCATTACAAAGGCACAATCCCCCAATTACGTGGGGGATTTCTGTCATAACACTCCCCAAACAGCTCTCAGCAGTGCATACAAAACCAATCTTAACAGCGTCCTCTCATGGCTATCCTCTGATTCAGCCACAAGCAAAGGTTATAACCGCACCAGCATAGGTAACAACACCTCAGGAGATGCAGTGTATGGCCTCTATGATTGCCGTGGTGATGTGGTTGGATACTTCTGTCAATTCTGTGTCTCTACTGCTGCAAGAGATGTTCTTCAGCGCTGCCCCAATAGAGTTTCTGCTTCCATATGGTATGATTTCTGCGTTCTCAGATACTCAAATGAGAACTTCTTTGGGAAAGTTACAATAGATCCTTCATGGCATAATGTCGGAACAAAAAACATCTCCAGTGCAATAGAGATTCAGAAAGGTGAGGATTTTATGAGAAGTTTGATCAGAAGAGCAACAACTAAGGGAACCAACAGGTTGTTCTATACAGGTGAGTTCAATTTGAGTTCTACTGAGAGAAGGTATGGCCTGGTGCAATGCACCATGGATGTTACAAATGAGGGGTGTAAACAGTGTTTGGAGGCCATGTTAGCACAAGTTCCCAAATGTTGTGCACAAAAGATGGGGTGGCTGGATGGGTCTTCAAGTTGTCTGATGAAGTATGATGACTATATGTTCTACCTTTTGCCAAATCAAACATCTTCAGTTCCTGTGCCTGATCTGCAAACAGCCAGACAAGGGGGTACTAGTAAGTCAAGAAACTTGATCGTTGGCTTAAGTTTGCCGGGGTCTGTAGCTCTACTATGTTTCAGTGTTTACTGCTTCTGGCGCAGGAATAGAGTTCGAAAAGATGGGCTAATACTTGATACCATTCCTCTATCTCCAAACGAAGAAACACTGAATGCAGACCTGCCTACAATCCCATTAATCACAATTCTTCATAGTACTGATAACTTTTCATTAGCATCTAAGTTAGGGGAAGGTGGATTTGGCCCTGTTTACAAGGGAACTCTACCTGATGGAAGACAAATTGCAGTTAAAAGGCTCTCTAAAGCTTCAGGTCAAGGCTCGGAGGAGTTCAAGAATGAAGTAATGTTTATAGCTAAATTGCAACATCGCAACCTTGTCAGACTTTTAGGATGCTGCTTGGAGAAAAATGAAAAGATACTTGTATATGAGTATATGTCAAATGCAAGTCTCGACTTTCACCTGTTTGATAAAGAAAAGAGAAAGCAACTTGATTGGAAACTAAGATTAAGCATTATCAATGGAATAGCAAGAGGTCTTTTATACCTTCATGAGGACTCACGACTGAAAATAATTCACAGAGATCTCAAAGCTAGCAATGTTCTATTGGACAATGAGATGAATCCCAAAATATCCGATTTTGGATTGGCAAGAGCTTTTGCAACAGGCCAGAATCAGGCAAATACAAATCGAGTAATGGGTACCTATGGATACATGGCTCCAGAATATGCAATGGAAGGATTATTTTCAGTCAAGTCTGATGTTTTCAGCTTTGGAGTACTTGTTTTAGAAATCATTTGTGGGAAAAAGAATAGTGGATTCTATCTGTCAGAACATGGTCAAAGTCTTATTTTATTTACATGGAAAAAGTGGTGTGAAGGAAAATGTTTGGAATTGATGGATTCAGTTTTGGAAGAAACCTGCATAGCCAATGAAGTTGTGAAGTGTATACACATTGGTCTATTGTGTGTTCAAGAAGATGCAGCAGATAGACCAACCATGTCAACTGTTGTTGTTATGCTGGCAAGTGACACAATGGCACTTCCAAAAGCAAAACCACCAGCATTTTCAGTTGGAAGAATGACTTTAGAGGAAGCATCTACTTCGAAAAGTTCCAAGAATCCTTCTATTAATATTGTAACAGTCTCTAACATTTCACCAAGGTAA | 1983 | 0.4029 | MEGIQNLRSMSYAFLLLLLSFRPLITKAQSPNYVGDFCHNTPQTALSSAYKTNLNSVLSWLSSDSATSKGYNRTSIGNNTSGDAVYGLYDCRGDVVGYFCQFCVSTAARDVLQRCPNRVSASIWYDFCVLRYSNENFFGKVTIDPSWHNVGTKNISSAIEIQKGEDFMRSLIRRATTKGTNRLFYTGEFNLSSTERRYGLVQCTMDVTNEGCKQCLEAMLAQVPKCCAQKMGWLDGSSSCLMKYDDYMFYLLPNQTSSVPVPDLQTARQGGTSKSRNLIVGLSLPGSVALLCFSVYCFWRRNRVRKDGLILDTIPLSPNEETLNADLPTIPLITILHSTDNFSLASKLGEGGFGPVYKGTLPDGRQIAVKRLSKASGQGSEEFKNEVMFIAKLQHRNLVRLLGCCLEKNEKILVYEYMSNASLDFHLFDKEKRKQLDWKLRLSIINGIARGLLYLHEDSRLKIIHRDLKASNVLLDNEMNPKISDFGLARAFATGQNQANTNRVMGTYGYMAPEYAMEGLFSVKSDVFSFGVLVLEIICGKKNSGFYLSEHGQSLILFTWKKWCEGKCLELMDSVLEETCIANEVVKCIHIGLLCVQEDAADRPTMSTVVVMLASDTMALPKAKPPAFSVGRMTLEEASTSKSSKNPSINIVTVSNISPR* | 661 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops3g02512 | 660 | Gene3D | - | 147 | 249 | IPR038408 | - | |
Rops3g02512 | 660 | Gene3D | - | 32 | 137 | IPR038408 | - | |
Rops3g02512 | 660 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 46 | 659 | - | - | |
Rops3g02512 | 660 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 312 | 417 | - | - | |
Rops3g02512 | 660 | ProSiteProfiles | Gnk2-homologous domain profile. | 32 | 137 | IPR002902 | - | |
Rops3g02512 | 660 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 463 | 475 | IPR008271 | GO:0004672|GO:0006468 | |
Rops3g02512 | 660 | SMART | serkin_6 | 342 | 618 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops3g02512 | 660 | ProSiteProfiles | Protein kinase domain profile. | 342 | 618 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops3g02512 | 660 | Pfam | Domain of unknown function (DUF3403) | 615 | 660 | IPR021820 | GO:0004674 | |
Rops3g02512 | 660 | FunFam | Liguleless narrow1 | 418 | 621 | - | - | |
Rops3g02512 | 660 | CDD | STKc_IRAK | 348 | 613 | - | - | |
Rops3g02512 | 660 | ProSiteProfiles | Gnk2-homologous domain profile. | 143 | 249 | IPR002902 | - | |
Rops3g02512 | 660 | FunFam | Cysteine-rich receptor-like protein kinase 28 | 34 | 136 | - | - | |
Rops3g02512 | 660 | Pfam | Salt stress response/antifungal | 166 | 247 | IPR002902 | - | |
Rops3g02512 | 660 | Pfam | Salt stress response/antifungal | 38 | 134 | IPR002902 | - | |
Rops3g02512 | 660 | Gene3D | Phosphorylase Kinase; domain 1 | 315 | 417 | - | - | |
Rops3g02512 | 660 | Pfam | Protein tyrosine and serine/threonine kinase | 344 | 612 | IPR001245 | GO:0004672|GO:0006468 | |
Rops3g02512 | 660 | SUPERFAMILY | Protein kinase-like (PK-like) | 328 | 645 | IPR011009 | - | |
Rops3g02512 | 660 | Gene3D | Transferase(Phosphotransferase) domain 1 | 418 | 623 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops3g02512 | Rops-Chr3 | 51870755 | 51876293 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops3g02512 | 15 | 647 | Receptor kinase-like Gene Family | AT4G05200 | 44.444 | 0.0 | 533 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Rops3g02512 | PK_Tyr_Ser-Thr | 3.4e-50 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops3g02512 | - | - | gmx:100795922 | 1022.69 |