Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02504 ATGGATGGAGCAAAACTCAATATGAGATCAATATCCTTTGTTTTCCTGCTATTGCTGAGCTTCAAACAACTCATTGCAAAGGCACAATCCGCCACCTATGTGGGAGATTTCTGTCACAACACACCCGAAAAAGTTCTCAGCAGTGCATACACAACCAATCTTGAAAACATCCTGTCATGGCTATCCTCTGATGCATTCACAAGCAAAGGTTACAACCACACAAGCATAGGTAACAACACCTCAGGAGATGCAGTGTATGGCCTCTATGATTGCCGTGGTGATGTGGTTGGATACTTTTGTCAATTCTGTGTCTCTACTGCTACTAGAGAAGTTCTTCAGCGCTGCCCCAATAGAATCTCTGCTGTGATATGGTATGATTTCTGCATTCTAAGGTACTCAAATGAGAATTTCTTTGGGAAAGTTACAACAGACCCTTCATGGCATGCTCTTGGAACAAAAAACATCTCCAATGCAATAGAGGTTCCGAAAGGTGAGGATTTTATGAGAAGTTTGATCGGAAAAGCAACTAAGGAGACCAACCAATTGTTCTATATGGGTGAGTTCAATTTCAGTTCTACTGAGAAAAGGTATGGCTTCGTGCAATGCAGCAGAGATCTTACAAATGAGGGGTGTAAACAGTGTTTGGAGGCCATGTTAGCACAAGTTCCTAAATGTTGTGCACAAAAGATGGGGTGGCAGGTTTTGGCTCCAAGTTGCTTGATAAAGTATGATGATTACATATTCTACCTTTTTCGCAATTCAACATCTTCAGTTCCTGTGCCGGGTCAGCAAACAGCCAAACAAGGGAGTACTAGTAACTCAAGAAACTTGATCATTGGCGTAAGTGTGCTGGGATCAGTAACTCTACTATGTTTCAGTGTCTACTGCTTCTGGAGCAGGAGGAATAGAGTTAGAAAAGATGGGCTGATACTTGATACCCTTCCTCCTCTATCTTCAAATGAGGAAACATTGAATGCAGACCTGCCTGCAATCCCACTAATCACAATTCTTCATAGTACTAATAATTTTTCAGAAGCATCTAAATTAGGGGAAGGTGGATTTGGCCCTGTTTACAAGGGAACTCTACCAGATGGAAGACAAATTGCAGTCAAAAGGCTCTCAAAAGCTTCTGGTCAAGGCCCTGAGGAGTTCAAGAATGAAGTAATGTTTATAGCTAAATTGCAACATCGCAACCTTGTAAGACTTTTGGGATGCTGTTTGGAGAAAAATGAAACGATACTAGTATATGAGTATATGTCAAATGCAAGTCTCAACTTTCACCTGTTTGATGATGAAAAACGAAAGCAACTCAACTGGAAACTAAGATTAAGCATTATAAATGGAATAGCAAGAGGTATTTTATACCTTCATGAGGACTCTCGACTCAAAGTAATCCACAGAGATCTCAAAGCTAGCAATGTTCTATTAGACAATGAGATGAATCCCAAAATATCCGATTTTGGATTGGCAAGAGCTTTTGCAACAGGTCAGAATCAGGCAAATACAAATCGAGTCATGGGTACCTATGGATACATGGCCCCAGAATATGCTATGGAAGGATTATTTTCAGTCAAATCTGATGTCTTCAGCTATGGAGTACTTGTTTTAGAAATCATCAGTGGGAAAAAGAACAGTGGATTCTATCTGTCAGATCATGGTCTCAGTCTTCTTTTATATACATGGCAAAAATGGTGTGAAGGAAAATATTTGGAATTGATGGATTCAGCACTGGAAGAAACCTGCATAACCAGTGAAGTTGTGAAGTGTATACACATTGGTCTATTGTGTGTTCAAGAAGATGCAGCAGATAGACCAACCATGTCCACTATTGTTGTAATGCTGGCAAGTGACACAATGGCCCTTCCAAAACCAAAACCACCAGCATTTTCAGTTGGAAGAATGACTCCAGGGGAAGCATCTACCTCAAAAAGTTCCAAGAATCTTTCTATTAATGATGTAACAGTCTCTAACATTTTACCAAGGTAA 1986 0.4018 MDGAKLNMRSISFVFLLLLSFKQLIAKAQSATYVGDFCHNTPEKVLSSAYTTNLENILSWLSSDAFTSKGYNHTSIGNNTSGDAVYGLYDCRGDVVGYFCQFCVSTATREVLQRCPNRISAVIWYDFCILRYSNENFFGKVTTDPSWHALGTKNISNAIEVPKGEDFMRSLIGKATKETNQLFYMGEFNFSSTEKRYGFVQCSRDLTNEGCKQCLEAMLAQVPKCCAQKMGWQVLAPSCLIKYDDYIFYLFRNSTSSVPVPGQQTAKQGSTSNSRNLIIGVSVLGSVTLLCFSVYCFWSRRNRVRKDGLILDTLPPLSSNEETLNADLPAIPLITILHSTNNFSEASKLGEGGFGPVYKGTLPDGRQIAVKRLSKASGQGPEEFKNEVMFIAKLQHRNLVRLLGCCLEKNETILVYEYMSNASLNFHLFDDEKRKQLNWKLRLSIINGIARGILYLHEDSRLKVIHRDLKASNVLLDNEMNPKISDFGLARAFATGQNQANTNRVMGTYGYMAPEYAMEGLFSVKSDVFSYGVLVLEIISGKKNSGFYLSDHGLSLLLYTWQKWCEGKYLELMDSALEETCITSEVVKCIHIGLLCVQEDAADRPTMSTIVVMLASDTMALPKPKPPAFSVGRMTPGEASTSKSSKNLSINDVTVSNILPR* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02504 661 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 315 418 - -
Rops3g02504 661 ProSiteProfiles Gnk2-homologous domain profile. 32 137 IPR002902 -
Rops3g02504 661 FunFam Cysteine-rich receptor-like protein kinase 10 146 248 - -
Rops3g02504 661 FunFam cysteine-rich receptor-like protein kinase 10 419 621 - -
Rops3g02504 661 CDD STKc_IRAK 349 614 - -
Rops3g02504 661 ProSitePatterns Serine/Threonine protein kinases active-site signature. 464 476 IPR008271 GO:0004672|GO:0006468
Rops3g02504 661 SUPERFAMILY Protein kinase-like (PK-like) 330 639 IPR011009 -
Rops3g02504 661 ProSiteProfiles Protein kinase domain profile. 343 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g02504 661 FunFam Cysteine-rich receptor-like protein kinase 28 34 136 - -
Rops3g02504 661 Pfam Domain of unknown function (DUF3403) 616 661 IPR021820 GO:0004674
Rops3g02504 661 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 48 657 - -
Rops3g02504 661 ProSiteProfiles Gnk2-homologous domain profile. 143 248 IPR002902 -
Rops3g02504 661 SMART serkin_6 343 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g02504 661 Gene3D Phosphorylase Kinase; domain 1 316 418 - -
Rops3g02504 661 Gene3D Transferase(Phosphotransferase) domain 1 419 621 - -
Rops3g02504 661 Pfam Salt stress response/antifungal 167 246 IPR002902 -
Rops3g02504 661 Pfam Salt stress response/antifungal 45 134 IPR002902 -
Rops3g02504 661 Pfam Protein tyrosine and serine/threonine kinase 347 613 IPR001245 GO:0004672|GO:0006468
Rops3g02504 661 Gene3D - 152 248 IPR038408 -
Rops3g02504 661 Gene3D - 31 137 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02504 Rops-Chr3 51768742 51772698 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02504 14 661 Receptor kinase-like Gene Family AT4G05200 43.601 0.0 539
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops3g02504 PK_Tyr_Ser-Thr 7.7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02504 - - gmx:100795922 1010.36