Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02499 ATGTTCCTTCTCCTCTTCACAACAACAAGAGCGCAATCCCCAATTTACATTTACAATTTTTGCCAGAACTCAACAGGAGAATCTCTCAGCACTTCATACAAAACCAATGTTAACAACCTCCTTTCCTGGATAACCTCTGATTCAGCCACAAGCATAGGATTTAACCAAACCACTATAGGCAACAACAACAATGGTGAAGATGATGCTGTTTATGGGAACTACAATTGCAGGGGTGACATCACAGGATATTTTTGTCAATTTTGTCTCAACACTGCTGTAAGAGAAATTGCTCAGCGCTGTCCCAACAGTATCTCAGCTATTATATGGTATGATATATGCATCATCCGTTACTCCAACCAGAGTTTTTTTGGCGAAGTTTCTTCAACCCCATCATGGAACATTACTGGATCCAAAAACATAAAGGACTCAACAGAGCTTGGGAAAGCAGAGGATTACATGGAGGGTTTGATAAGAAAAGTAAATGAGGCCAACAAGTCTTGGGCAATGAGTGAGTTTGATTGGAGTGACACTGAGAAAAGGTATGGCTTGGTGCAGTGTGGTAGAGACCTTGCTAGTGATAAGTGCAGGCAGTGTTTGGAGGATATGTTGGACATAGTTCCCAGATGCTGTAGAACAAAGGTAGCATGGGCAGTTGTGGCACCAGGCTGTGGTATGAGGATTGATGATTATATGTTCTACCAGGGTACTAATCAAACAGGATCCTCTTCTCCTATGCCAAATCCAGCCAAGCAGGAAGGTGCAAGTAATACCAAGACCTTGATCATCATCTTAGTAAGTGTGTTGGTGGCAGTAGTTTTACTAAGTTGTGGTGTCTACTACTCTTGGAGCAGGAGTTGGTTATGTAAAGATGGATTGCTGATGGAGAACATTCCTATAGCTTCTCATGATCATGTTCAGAGGGAGGATTCATTGGATACAGACCTTCCTATAATTCCTTTAAGTGTAATTCAACAGATCACTAAATACTTTTCAGAGTCATCTAAATTAGGAGAAGGTGGATTTGGCTCTGTTTACAAGGGTACTTTACCAGATGGCACAGAAATTGCTGTCAAAAGGCTTGCAGAAACGTCTGGTCAAGGTTTAGAGGAGTTCAAGAATGAAGTGATCTTCATAGCTAAACTGCAACACAGAAACCTTGTGAAACTCTTGGGTTGCTGCATTGAGGGAAATGAAAAGCTACTGGTATATGAGTACATGCCAAATTCAAGCCTTGACTTTCACCTTTTCAATGAGGAAAAGCTAAAGCAACTAGATTGGCAATTACGACTAAGCATTATCAATGGAATTGCAAGAGGACTGTTATACCTTCATGAGGATTCTCGACTTAGAGTAATCCATAGAGATCTCAAAGCCAGCAATGTTCTTCTGGACCATGAAATGAATCCAAAAATATCAGATTTTGGATTGGCAAGGAGATTTGAAAAAGGCCAAAGTCAAACAAAAACAAAAAGAGTTATTGGCACCTATGGATACATGGCTCCAGAATATGCTATGGCAGGGTTATTTTCAGTGAAATCCGATGTTTTTAGCTTTGGGGTTCTTCTATTAGAAATCATTTATGGGAAAAGGAACAGTGAATTCTTTCTTTCAGAACAAGGCCAAAGTCTTCTATTATATACTTGGAGACTTTGGTGTGAAGGGAAGAGTTTGGAATTAATCAATCCGATACTCAAAACATCATACATAGAAAGTGAAGTTATGAAGTGCATACACATTGGTTTGTTATGTGTACAAGAAGATGCAGCAGATCGACCAACCATGTCCATTGTCGTTCTCATGCTAGGGAGTGAAACAATGGCCCTTCCCACACCCAAGCAACCTGCATTTTCAGTTGGAAGAATGTCGAATGAAGAAGATCCAACTTCAAAAAATTCCAAGGATAATTCTATTAATGAAGTAACAGTAACTATTGTTGCACCTAGATAG 1947 0.3991 MFLLLFTTTRAQSPIYIYNFCQNSTGESLSTSYKTNVNNLLSWITSDSATSIGFNQTTIGNNNNGEDDAVYGNYNCRGDITGYFCQFCLNTAVREIAQRCPNSISAIIWYDICIIRYSNQSFFGEVSSTPSWNITGSKNIKDSTELGKAEDYMEGLIRKVNEANKSWAMSEFDWSDTEKRYGLVQCGRDLASDKCRQCLEDMLDIVPRCCRTKVAWAVVAPGCGMRIDDYMFYQGTNQTGSSSPMPNPAKQEGASNTKTLIIILVSVLVAVVLLSCGVYYSWSRSWLCKDGLLMENIPIASHDHVQREDSLDTDLPIIPLSVIQQITKYFSESSKLGEGGFGSVYKGTLPDGTEIAVKRLAETSGQGLEEFKNEVIFIAKLQHRNLVKLLGCCIEGNEKLLVYEYMPNSSLDFHLFNEEKLKQLDWQLRLSIINGIARGLLYLHEDSRLRVIHRDLKASNVLLDHEMNPKISDFGLARRFEKGQSQTKTKRVIGTYGYMAPEYAMAGLFSVKSDVFSFGVLLLEIIYGKRNSEFFLSEQGQSLLLYTWRLWCEGKSLELINPILKTSYIESEVMKCIHIGLLCVQEDAADRPTMSIVVLMLGSETMALPTPKQPAFSVGRMSNEEDPTSKNSKDNSINEVTVTIVAPR* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02499 648 SUPERFAMILY Protein kinase-like (PK-like) 313 601 IPR011009 -
Rops3g02499 648 CDD STKc_IRAK 336 601 - -
Rops3g02499 648 SMART serkin_6 330 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g02499 648 Pfam Domain of unknown function (DUF3403) 603 648 IPR021820 GO:0004674
Rops3g02499 648 ProSitePatterns Protein kinases ATP-binding region signature. 336 358 IPR017441 GO:0005524
Rops3g02499 648 ProSiteProfiles Gnk2-homologous domain profile. 127 232 IPR002902 -
Rops3g02499 648 Gene3D Phosphorylase Kinase; domain 1 296 405 - -
Rops3g02499 648 Gene3D Transferase(Phosphotransferase) domain 1 406 609 - -
Rops3g02499 648 FunFam Cysteine-rich receptor-like protein kinase 28 17 121 - -
Rops3g02499 648 ProSiteProfiles Gnk2-homologous domain profile. 15 122 IPR002902 -
Rops3g02499 648 MobiDBLite consensus disorder prediction 611 640 - -
Rops3g02499 648 ProSiteProfiles Protein kinase domain profile. 330 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g02499 648 Pfam Salt stress response/antifungal 153 230 IPR002902 -
Rops3g02499 648 Pfam Salt stress response/antifungal 21 120 IPR002902 -
Rops3g02499 648 Gene3D - 14 122 IPR038408 -
Rops3g02499 648 Gene3D - 132 232 IPR038408 -
Rops3g02499 648 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 295 405 - -
Rops3g02499 648 FunFam cysteine-rich receptor-like protein kinase 10 406 608 - -
Rops3g02499 648 ProSitePatterns Serine/Threonine protein kinases active-site signature. 451 463 IPR008271 GO:0004672|GO:0006468
Rops3g02499 648 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 27 645 - -
Rops3g02499 648 Pfam Protein tyrosine and serine/threonine kinase 333 598 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02499 Rops-Chr3 51691255 51696689 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02499 1 648 Receptor kinase-like Gene Family AT4G05200 41.840 0.0 542
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops3g02499 PK_Tyr_Ser-Thr 2.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02499 - - mtr:11406796 933.324