Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02495 ATGTCTGAAGAATCACAAAGGATTGTGGTGATCCACTATGCATCAAAAGACTTCAGTAAAAGTGCCCTTAAATGGGCCCTGAATGGCTTTTCACTTGAGCATGGAGATAATCTTACACTTCTTGCAATTGTAAATAGTCCTAGCAGGATTCCCTTCATTGCACCTGCTAGATTTCGGGGATTATTTGAGACTGACCAGAAAATTGTTGATGAAGAGGTTGCCAAGAAGAAGGAAAAGCTCCATAATAATCCAAGCATCAGGAAAATCTCTGAGCAGTGTGAAAGAGACAAGATTCAATTCTGTATAGAAGTGCTTCCAGGCAATTTACCAGAGGTTGCTGTAATTGCTGCCATCCGTTTGAAGGCAACATCAGTGATACTTGATAGAGGTCTGAAGAAATATAGCAAGGATTTCATGCAGAGTCTCTCTTGTGCTTTGCTAATAATGAAACGTGATAACTCCATTAAGCACTTGAGAGGACCAAGGAAAACAAAGCTTTCTGGCAGAGGCAATGGAAATGCAAGTTGTGTAACATGTTCTAAATCCTCACCAAGTATGCAGCGTTTGGCAAAAGCAGTTTTCTGCTCCAAATCCAGCCCTACCCTTACAAAGGTTGTGTGTCCCAGACTTGATTTTCAAATAAAACAAAGCACTGAAAATATAGAACTAGACATGGCAAGAGGGTATTGCCTATTAACCATTCCTGATCCTCAAAAGACTAGTCCTGCTGAATTGTATCACATGGAGACAACAGTTGAACATAGCAACAACCATGGAGCATATCAGATAGTTGAACAATTTAGAAATTCTGTTTGCTCAGTTTGTGAGAACAGAAGACCAAAATTTGAATTGATGAAAGAATTCACATATGCTGAGCTGCATGAATCCACAAATGGTTTTTCCCCAAAGAACTATTTATCAGAAGGTGGATTTGGTTCTGTCTATAGGGGCATGCTGCAAGGACTAAAGATTGCAGTTAAGCAACATAAGTGTGCAAGCCTCCAAGGAGAGAAGGAATTCAAGTCTGAAGTTAATGCACTCAGCAAAGCTATACATGAGAATGTGGTCATGCTGCTGGGATCTTGTTCTGAGGGAAATAACAGGCTTCTTGTATATGAATTTGTTTGCAATGGCTCGCTTGACCAACATTTATCACAACACTCTGGAAAACCTCTTAGTTGGCCAAACAGGATCAAAGTAGCTATTGGAGCTGCAAAAGGCTTATTATACTTGCATGAGAAGAATATAATACATAGAGATATTAGACCAAGTAACATCCTTGTCACACACGATTATGAGGCAATGGTGGGAGATTTTGGTCTGGCTAGAACTGAACAAATGGACTCCATATACTCAACAGATGTTGTTGGAACTTTAGGGTATTTGGCACCGGAATATGCAGAATCTGGCAAAGTGTCAACCAAGACGGATGTGTATTCTTTTGGGATGGTTCTTCTTCAGCTAATAACTGGAATGAGGATCACAGACAAAAGGCTTGGAAACAAAAGTCTCGTGGGATGGGCTAGGCCACTATTGAAAGAAAGGAACTATCCAGATCTAATTGATGAAAGGATGATGGATACCAATGACTGCCATCAGCTTTTTTGGATGATTCGTCTAGCAGAAAAATGTCTCAGCAGAGATCCTAAGAAGCGATTGTCAATGGATACAGTGGTGAGTGCATTAACTTATATAGTAGAAGGCAGCACATGCAGTATTGTACTTAGAGACTGTTCCCCTGCAAGGTCATATTCATCCAATGACAAGTCAGAATCTCTTAATTCAGATGTCTCTCAGGAATTGGAAGGTGAAGATGAAAACATCTATGCAGGATACACTCCAGTTAGTTTAAGACCCCCACCATCTCCTCCAATAGGAAGCACTTCATTAAGTACATCATGGATGTTCATGGGGCTAAGAAAATGTCCTTATGAAGATTTAACCAATAATGAGGAGGGTGGAAGGTCATATGATCAATGTGGGTTATTTTAA 1992 0.4011 MSEESQRIVVIHYASKDFSKSALKWALNGFSLEHGDNLTLLAIVNSPSRIPFIAPARFRGLFETDQKIVDEEVAKKKEKLHNNPSIRKISEQCERDKIQFCIEVLPGNLPEVAVIAAIRLKATSVILDRGLKKYSKDFMQSLSCALLIMKRDNSIKHLRGPRKTKLSGRGNGNASCVTCSKSSPSMQRLAKAVFCSKSSPTLTKVVCPRLDFQIKQSTENIELDMARGYCLLTIPDPQKTSPAELYHMETTVEHSNNHGAYQIVEQFRNSVCSVCENRRPKFELMKEFTYAELHESTNGFSPKNYLSEGGFGSVYRGMLQGLKIAVKQHKCASLQGEKEFKSEVNALSKAIHENVVMLLGSCSEGNNRLLVYEFVCNGSLDQHLSQHSGKPLSWPNRIKVAIGAAKGLLYLHEKNIIHRDIRPSNILVTHDYEAMVGDFGLARTEQMDSIYSTDVVGTLGYLAPEYAESGKVSTKTDVYSFGMVLLQLITGMRITDKRLGNKSLVGWARPLLKERNYPDLIDERMMDTNDCHQLFWMIRLAEKCLSRDPKKRLSMDTVVSALTYIVEGSTCSIVLRDCSPARSYSSNDKSESLNSDVSQELEGEDENIYAGYTPVSLRPPPSPPIGSTSLSTSWMFMGLRKCPYEDLTNNEEGGRSYDQCGLF* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02495 663 ProSiteProfiles Protein kinase domain profile. 300 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g02495 663 SMART tyrkin_6 300 562 IPR020635 GO:0004713|GO:0006468
Rops3g02495 663 Gene3D Phosphorylase Kinase; domain 1 282 374 - -
Rops3g02495 663 PANTHER OS01G0253100 PROTEIN 239 566 - -
Rops3g02495 663 Pfam Protein tyrosine and serine/threonine kinase 304 562 IPR001245 GO:0004672|GO:0006468
Rops3g02495 663 Gene3D Transferase(Phosphotransferase) domain 1 375 576 - -
Rops3g02495 663 ProSitePatterns Tyrosine protein kinases specific active-site signature. 416 428 IPR008266 GO:0004672|GO:0006468
Rops3g02495 663 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK1 isoform X1 375 577 - -
Rops3g02495 663 SUPERFAMILY Protein kinase-like (PK-like) 285 563 IPR011009 -
Rops3g02495 663 FunFam Proline-rich receptor-like protein kinase PERK8 262 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02495 Rops-Chr3 51464365 51472519 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02495 288 601 Trihelix Transcription Factor Family AT5G38560 43.598 8.28e-77 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Rops3g02495 PK_Tyr_Ser-Thr 2.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02495 - - gmx:100810950 970.689