Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02488 ATGGAGTGGCTTCTGCAATTCCTTCATTTTTTCTTTTTAGCTTCTCTTCTTATCTGCAGTACAGTGATTTCAGATCAAATTCCAAAGCCTTATGTAGTTTATATGGGAAATTCATCACCAAACAACATTTGGGTAGATGGCCAAATACCAGAATCAGCACATCTACAACTATTATCATCAATTATTCCTAGAAGAGAAAGTGAGAGGATAGCTCTAATCCACCATTACAATCATGCCTTTAATGGGTTCTCTGCCATGCTTACAGAGAGTGAAGCTTCTGCATTATCTGGTCACGATGGTGTGGTGTCAGTGTTCCCTGATCCAGTTCTTCAGTTGCATACCACACGATCTTGGGATTTCTTAGAATCAGAGTTGGGGATGAAGCCACGTGGCAGTTTTCCACACCTACACTCGTCAAGTGATATCATTATTGGTATGATTGACACTGGGATATGGCCAGAATCTCCAAGTTTCAGAGATGATGGTATAGGGAAGATTCCTTCAAGATGGAAAGGAGTTTGCATGGAGGGTCATGATTTCAAGAAATCCAATTGCAACAGAAAATTGATAGGTGCAAGATACTATAATACCCAAATTAATTCAAGTGGCAACCAAACTCATATTGAAGGAACCAAAGGTTCCCCAAGAGATTCTGTTGGACATGGGACTCACACTGCATCAACAGCAGCTGGTGTCCATGTCAACAATGCTAGTTATTTTGGTTTAGCAAAAGGAACAGCAAGAGGTGGTTCACCTTCTACTAGGATTGCTGCCTATAAAACATGCTCAGAAGAAGGTTGCTCTGGTGCCGCCTTACTAAAGGCCATTGATGATGCTATAAGGGATGGAGTGGATATAATCTCAATCTCTATTGGACTTAGCTCACTAATACAATCAGACTTTTTGAATGATCCTATAGCCATTGGAGCATTTCATGCAGAACAAATGGGGGTCATGGTGGTGTGTTCAGCTGGGAATGATGGTCCTGATCCTTATACAGTTGTGAACACAGCACCATGGATATTTACTGTTGCAGCTTCTAATATTGATAGGAACTTCCAATCAACTCTTGTCCTTGGAAATGGGAAAACTTTCCAAGGTACTGGCATCAACTTGTCAAACCTTACTCGTTCAAAGATGTATCCTCTTGTCTTTGGAGAGAAAGTTGCTGCCAAATTTGCTCCAGCATCAGAAGCTAGGAACTGTTATCCTGGATCACTAGATTACAACAAAGTTGCAGGCAGCATTGTTGTTTGTGTTAATGATGATCCAAATGTTTCAAGGCGAATCAAGAAGCTAGTTTTACAAGATGCAAGAGCCATGGGGATGATACTCATTGATGAGAGCAACAAAGATGTTCCCTTTGATGCAGATGTATTTCCCTACACAGAGGTTGGCAATCTTGAAGGGCATCAGATCCTTGAGTACATAAACTCTACCAAGAACCCAACTGCAACAGTTCTTCCAACAGCAGAAGTTCCTAGGTATAGGCCTGCACCAATTGTTGCATCTTTCTCATCCAGAGGTCCTTCAAGCCTTACAGAAAACATTCTCAAGCCAGATGTCATGGCTCCAGGCATTGCCATTTTAGCTGCCATGATTCCTAACACTGATGAACCAGGAAGTGTTCCAATTGGGAAAAAGCCATCCTTGTTTGGCATAAAATCTGGTACATCTATGGCTTGCCCACATGTGACAGGTGCAGCAGCATTCATCAAATCAATACATGGAAGATGGAGTCCTTCAATGATCAAATCAGCATTGATGACAACAGTTACAACCTACAATAACTTGAGGAAGCCTGTGACCAACAGCTCAAACTACTTTGCCAACCTACATGAAATGGGAGTTGGGGAAATTAATCCACTTAGAGCTCTCAACCCTGGTTTAGTCTTTGAAACAACTGTGGAAGACTATATCAGATTCCTTTGTTATTATGGTTATTCAAAGAAAAACATAAGGTCAATGTCTAAGAATAATGTCATTTGTCCAAGCAACTCCTCTGAAGATCTCATCTCCAACATCAATTACCCATCAATCTCTATAAAATCACTTAAAAGGCCACAGAAAGCAAAAGTGATCACAAGAACAGTTACCAATGTGGGGTCCCTTAATGCCACATATGTTGCAAAGGTGCATGCTCCTAAGGGATTAATTGTCAAGGTCTCCCCCAATAAACTTGTATTCTCTGAGGGTGTTCAAAGAATGACCTATAAAGTCTCATTCTATGGCAAGGAGGCACATGGTGGATACAATTTTGGGTCTATAACATGGCTTGATGGTAGACATTATGTTCATACAGCTTTTGCAGTCAAAATTGAATAA 2325 0.4082 MEWLLQFLHFFFLASLLICSTVISDQIPKPYVVYMGNSSPNNIWVDGQIPESAHLQLLSSIIPRRESERIALIHHYNHAFNGFSAMLTESEASALSGHDGVVSVFPDPVLQLHTTRSWDFLESELGMKPRGSFPHLHSSSDIIIGMIDTGIWPESPSFRDDGIGKIPSRWKGVCMEGHDFKKSNCNRKLIGARYYNTQINSSGNQTHIEGTKGSPRDSVGHGTHTASTAAGVHVNNASYFGLAKGTARGGSPSTRIAAYKTCSEEGCSGAALLKAIDDAIRDGVDIISISIGLSSLIQSDFLNDPIAIGAFHAEQMGVMVVCSAGNDGPDPYTVVNTAPWIFTVAASNIDRNFQSTLVLGNGKTFQGTGINLSNLTRSKMYPLVFGEKVAAKFAPASEARNCYPGSLDYNKVAGSIVVCVNDDPNVSRRIKKLVLQDARAMGMILIDESNKDVPFDADVFPYTEVGNLEGHQILEYINSTKNPTATVLPTAEVPRYRPAPIVASFSSRGPSSLTENILKPDVMAPGIAILAAMIPNTDEPGSVPIGKKPSLFGIKSGTSMACPHVTGAAAFIKSIHGRWSPSMIKSALMTTVTTYNNLRKPVTNSSNYFANLHEMGVGEINPLRALNPGLVFETTVEDYIRFLCYYGYSKKNIRSMSKNNVICPSNSSEDLISNINYPSISIKSLKRPQKAKVITRTVTNVGSLNATYVAKVHAPKGLIVKVSPNKLVFSEGVQRMTYKVSFYGKEAHGGYNFGSITWLDGRHYVHTAFAVKIE* 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02488 774 ProSitePatterns Serine proteases, subtilase family, serine active site. 557 567 IPR023828 -
Rops3g02488 774 FunFam subtilisin-like protease SBT1.5 350 493 - -
Rops3g02488 774 Gene3D - 350 494 - -
Rops3g02488 774 FunFam Subtilisin-like protease SBT1.5 141 371 - -
Rops3g02488 774 Pfam Fibronectin type-III domain 674 771 IPR041469 -
Rops3g02488 774 SUPERFAMILY Subtilisin-like 113 630 IPR036852 GO:0004252|GO:0006508
Rops3g02488 774 ProSiteProfiles Serine proteases, subtilase domain profile. 117 626 - -
Rops3g02488 774 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 113 IPR037045 -
Rops3g02488 774 PRINTS Subtilisin serine protease family (S8) signature 139 158 IPR015500 -
Rops3g02488 774 PRINTS Subtilisin serine protease family (S8) signature 556 572 IPR015500 -
Rops3g02488 774 PRINTS Subtilisin serine protease family (S8) signature 217 230 IPR015500 -
Rops3g02488 774 CDD Peptidases_S8_3 110 591 IPR034197 -
Rops3g02488 774 Gene3D - 643 773 - -
Rops3g02488 774 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 32 768 IPR045051 -
Rops3g02488 774 CDD PA_subtilisin_like 356 487 - -
Rops3g02488 774 MobiDBLite consensus disorder prediction 201 226 - -
Rops3g02488 774 Pfam Subtilase family 139 596 IPR000209 GO:0006508|GO:0008236
Rops3g02488 774 Gene3D Peptidase S8/S53 domain 141 639 IPR036852 GO:0004252|GO:0006508
Rops3g02488 774 Pfam Peptidase inhibitor I9 31 113 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02488 Rops-Chr3 51370023 51380940 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02488 31 771 Subtilisin-like Serine Gene Family AT1G20150 42.707 0.0 589
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02488 K25898 - gmx:100781053 1291.95