Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02453 ATGTATCCTCAGGTGTGTACCAGACCTGATTTGTCTTTTGTTGTTAGTGTTCTGGGTAGATTCTTATCTAATCCTGGACATGCTCATTGGGTTGCTGCTAAAATGGTTATGAGGTATTTGCAAAAGACAAATGATTACATGTTTGTTTATCGAAAGGTTGATGACTTGAGTGTTGTTGGCTACTGTGATTCAGATTATGCAGGTTGTCCAGATGATGAGAGATCCACTTCTGAATATATTTTCATGCTAGCTGGAGGAGCTATTTCTTGGAAAAGTGTGAAACAAACTTTGGTAGCTTCTTCCACTATGGAAGCTAAGTTTGTTGCGTGTTATGCTATAACGAAGGGTGGTGAGAAGGCTCATGTTGATGTTAGGGGCAATGACTTTGATGCTATACCCTTTGGTACTGGACGTAGAATGTGTGCTGGTATGAGCCTGGGGTTTAGGATGGTTCAACTTCTCATTGCAACATTGGCATATACATTTGAATGGGAGCTAGAGAATGGGCTGAACCCAGAAAAGCTCAACAAGGACTCCACAAATCACAACACCATTTGTTGCTTAAGCTCATTCACATGA 579 0.4093 MYPQVCTRPDLSFVVSVLGRFLSNPGHAHWVAAKMVMRYLQKTNDYMFVYRKVDDLSVVGYCDSDYAGCPDDERSTSEYIFMLAGGAISWKSVKQTLVASSTMEAKFVACYAITKGGEKAHVDVRGNDFDAIPFGTGRRMCAGMSLGFRMVQLLIATLAYTFEWELENGLNPEKLNKDSTNHNTICCLSSFT* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02453 192 SUPERFAMILY Cytochrome P450 125 171 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g02453 192 CDD RNase_HI_RT_Ty1 59 115 - -
Rops3g02453 192 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 134 143 IPR017972 GO:0005506|GO:0016705
Rops3g02453 192 Gene3D Cytochrome P450 115 186 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g02453 192 Pfam Cytochrome P450 125 176 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g02453 192 PANTHER GAG-POL-RELATED RETROTRANSPOSON 7 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02453 Rops-Chr3 50466306 50470552 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02453 116 180 Cytochrome P450 AT5G07990 60.000 1.90e-22 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02453 - - vvi:132253135 184.882