Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02452 ATGGGACAGGAAGATCTTTGCATGAACATAAAATTAAGGGATTGTGGTTTTCTCAACAGCCAAGGAATCCCATATGTTATATTTTGGAAGAATGCTTTTTCTTGTTATGCTGCCTGCCATTTTCGTCAAGCATTTCTTTCAGTGGTGAAGAGTTCATCTACACATACATGGGATGCTTTCCACCTTGTAAGAGCCTCTTTTGAACTTTACTGTGTTCAAAATAATCAAGTACTTCCTACCGACAGCAATGATGCTGATAGTGAGATGGGGCCACACCTTCTTGGTAACTGTCTCAAAATCAATGTTGACCCTCCGGAGATGGGTGAAGAAGATGATGAAGAAAGTTCCTCAGGCAGTCTTCCTGCTATAAAGATACATGAAGATGAAGTGAACTTGAGATTTCTCATCTGTGGTGCACCTTCCACTGTTGTAAGCTTCTTTGGAATTCTACTTCCTGTTTTTTGTGCAATGGGTTATACTGGTTCTGCTGTTGCTTATTTTGAAGAAAGTCTATCATATAACTAA 525 0.3943 MGQEDLCMNIKLRDCGFLNSQGIPYVIFWKNAFSCYAACHFRQAFLSVVKSSSTHTWDAFHLVRASFELYCVQNNQVLPTDSNDADSEMGPHLLGNCLKINVDPPEMGEEDDEESSSGSLPAIKIHEDEVNLRFLICGAPSTVVSFFGILLPVFCAMGYTGSAVAYFEESLSYN* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02452 174 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 4 17 143 IPR042293 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02452 Rops-Chr3 50441025 50444176 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02452 18 147 ARID Transcription Factor Family AT3G43240 54.198 1.33e-36 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02452 - - gmx:100816540 227.254