Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops3g02448 | ATGTACCACCCTGGCATGCTTGCCCCCGCTATGTCTCAGATGGAGCCTGTTCCAAGTGGAAATCTGCCTCCTGGTTTTGATACTTCTGCATGCCGTAGTGTTTACGTAGGAAATATTCATGTAAATGTCACCGATAAGCTTCTTGCGGAAGTTTTTCAGAGTGCTGGTCCTCTTGCTGGGTGCAAGCTTATAAGAAAAGAAAAGTCCTCTTATGGTTTTGTGGACTACCATGATCGAGCATCTGCAGCCCTTGCAATAATGACTTTGCATGGACGGCAACTATATGGTCAAGCACTTAAGGTGAATTGGGCATATGCCAATAACAGTAGGGAGGATACCTCAGGGCACTTCAATGTATTTGTCGGTGATTTGAGCCCCGAGGTTACTGATGCAACTTTATTTGCATGCTCCTCGGTCTATCCTAGTTGTTCTGATGCAAGGGTTATGTGGGATCACAAAACTGGTCACTCTTGTTACCTTGTCCAAAGGCCTTCCCCATGA | 501 | 0.4591 | MYHPGMLAPAMSQMEPVPSGNLPPGFDTSACRSVYVGNIHVNVTDKLLAEVFQSAGPLAGCKLIRKEKSSYGFVDYHDRASAALAIMTLHGRQLYGQALKVNWAYANNSREDTSGHFNVFVGDLSPEVTDATLFACSSVYPSCSDARVMWDHKTGHSCYLVQRPSP* | 167 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops3g02448 | 166 | Gene3D | - | 116 | 160 | IPR012677 | - | |
Rops3g02448 | 166 | PANTHER | TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED | 30 | 157 | - | - | |
Rops3g02448 | 166 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 32 | 106 | IPR000504 | GO:0003723 | |
Rops3g02448 | 166 | FunFam | Nucleolysin TIAR-like protein | 1 | 115 | - | - | |
Rops3g02448 | 166 | Gene3D | - | 8 | 115 | IPR012677 | - | |
Rops3g02448 | 166 | SMART | rrm1_1 | 33 | 102 | IPR000504 | GO:0003723 | |
Rops3g02448 | 166 | SUPERFAMILY | RNA-binding domain, RBD | 32 | 158 | IPR035979 | GO:0003676 | |
Rops3g02448 | 166 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 34 | 100 | IPR000504 | GO:0003723 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops3g02448 | Rops-Chr3 | 50367260 | 50367760 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops3g02448 | 33 | 159 | Eukaryotic Initiation Factors Gene Family | AT2G23350 | 30.827 | 6.08e-11 | 58.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops3g02448 | K13201 | - | gmx:100790916 | 316.235 |