Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02443 ATGGGACCCTTCATTAGTCGTTTGTTGTCACACTTTCAGAGCTTGTGTTCTCCTTTGATTATCATCCTAAATTTTTGCCTAACCATTTTCAAAGCACTTTTGATTAACAAAAGCAGCAGACACAGTCTTCCCCCAGGTCCTAAACCATGGCCTATAGTTGGCAACCTTCCTGAAATGCTTGCAAACAAGCCTACATTCAGGTGGATACACAAGCTAATGAAAGAAATGAACACTGAGATAGCTTGTATTCGCCTTGGAAATGTCCATGTTATCCCTGTGACATGCCCCATCATTGCACGTGAATTCTTGAGAAAACAAGATGCTGATTTTGCATCTAGGCCTATAAGCATGTCCACCGACATCATCAGCAATGGTTATTTGACCACAACTCTTGTACCCTTTGGGGAGCAATGGAAGAAAATGAAAAAGATCATCTCAAACGATTTGCTCTCTACCACCAAACATCAACGGTTTCAACACAAAAGGGATGAAGAAGCTGATAACCTTATGTTTTATGTCTACAACAAATGTAAAAATGACAACCTTGTGAATGTCAGGGTTGCTGCACGACATTATTGTTGTAATGTGATCAAGAAACTGTGTTTGAATATAAGATACTTTGGAAAAGGTGGGAAATATGGAGGGCCTGGTTGTGAGGAAGTAGAACATCTAGATGCTGTTTTCACATTGCTCAAGCACATTTATGCCTTCTATCTTTCTGATTATGTCTCAATCTTGAGGGGACTCGACTTGGATGGTCATGAGGCCAAGGTAAAAGAGGCTGTCACAATCGTGAGCAAGTATCATGATCCCATCATTGAACAGAGAATCAAACACTGGAACGATGGATCAAAGTTTGAAGTTGAGGATTTCCTTGATATTCTGATCTCACTAAAACATGCGGACAATAACCCAATATTGACACCACAGGAAATCAAAGCTCAAATTATAGAATTGATGATGGCAGCAGTGGATAACCCATCAAATGCAGTTGAATGGGGTCTTTCAGAAATGATAAATCAGCCTGAGTTGCTTCAACGAGCCACTGAAGAATTGGACAATGTGGTAGGGAAAGAAAGACTAGTTCAAGAATCAGATATTCCTAAGCTTAATTATGTGAAGGCTTGTGCAAGAGAAGCTTATCGTCTTCATCCCGTTGCGCCTTTTAATCTTCCTCATGTTTCTACGAAAGACACAATGGTTGGTAATTACCTAATTCCAAAGGGTAGTCATGTGTTGTTGAGCAGATCAGCACTTGGTCGAAACCCAAAAGTTTGGGATGAACCAAACAAGTTCAAACCGGAACGCCACCTTAAGAATGGTGGTTCTGAGGTGGTTTTGACAGAGCCAGATCTTAAGTTGATATCATTTACCACAGGAAGGCGTAGTTGTCCTGGAATCATGCTTGGCACCACAATGACTATAATGCTATTTGCTAGGTTACTTCATGGCTTCACTTGGAGTGCACCAACTAATGCGTCAAGCATCAATCTTAGTGAGTCCAATGATGATATGTTTCTTGCTGAGCCACTAGTGGCAATAGCAAAGCCCAGGTTAGCAACAAAATTGTATCGATAG 1578 0.4081 MGPFISRLLSHFQSLCSPLIIILNFCLTIFKALLINKSSRHSLPPGPKPWPIVGNLPEMLANKPTFRWIHKLMKEMNTEIACIRLGNVHVIPVTCPIIAREFLRKQDADFASRPISMSTDIISNGYLTTTLVPFGEQWKKMKKIISNDLLSTTKHQRFQHKRDEEADNLMFYVYNKCKNDNLVNVRVAARHYCCNVIKKLCLNIRYFGKGGKYGGPGCEEVEHLDAVFTLLKHIYAFYLSDYVSILRGLDLDGHEAKVKEAVTIVSKYHDPIIEQRIKHWNDGSKFEVEDFLDILISLKHADNNPILTPQEIKAQIIELMMAAVDNPSNAVEWGLSEMINQPELLQRATEELDNVVGKERLVQESDIPKLNYVKACAREAYRLHPVAPFNLPHVSTKDTMVGNYLIPKGSHVLLSRSALGRNPKVWDEPNKFKPERHLKNGGSEVVLTEPDLKLISFTTGRRSCPGIMLGTTMTIMLFARLLHGFTWSAPTNASSINLSESNDDMFLAEPLVAIAKPRLATKLYR* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02443 525 Pfam Cytochrome P450 44 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g02443 525 Gene3D Cytochrome P450 36 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g02443 525 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 17 524 - -
Rops3g02443 525 CDD CYP79 78 519 - -
Rops3g02443 525 FunFam Cytochrome P450 9 36 522 - -
Rops3g02443 525 SUPERFAMILY Cytochrome P450 44 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g02443 525 PRINTS E-class P450 group I signature 331 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g02443 525 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g02443 525 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g02443 525 PRINTS E-class P450 group I signature 311 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g02443 525 PRINTS E-class P450 group I signature 374 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g02443 525 PRINTS E-class P450 group I signature 192 210 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g02443 525 PRINTS E-class P450 group I signature 415 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g02443 525 PRINTS E-class P450 group I signature 98 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02443 Rops-Chr3 50049043 50052311 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02443 31 524 Cytochrome P450 AT5G05260 55.888 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02443 - K14984 gmx:100786887 766.148