Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02434 ATGGCAGAGGTAATCAGCAACATTCCCTCTGATTCCCTTGACAAATCCCCTTCCTCTTCCGCTCCTCCTCCTCCTCCCCCTCCCCCTCCGCCGCCGCATCCTCAGTCGGATTCTGATCTCCCTCCGCCGCTGCCGCCTCCAAGAAGGAGGGACAGGAGGGATGAGCGGGATTTCGATCGCCCCCGCCGTGATTACTACGACAGAGATAGGGACTTCAAGCGCCGCCGCAGTCCCAGCCCTCCCCACCGTGACCGCCGCTATTCCCCACCTTTACGGCGCTCCCCTCCGCCCTATAAGCGCTCCAGGAGGGGTAGTCCGCGTGGCGGTTACGGACCTGATGATAGACTTGGATATGATTATTATGGCGGTTATGAACGGGGAGTGGGAGGAAGAGCTGGTTATGTAGATGACAAGCCTTATGGCAGGTTTGGACATCGTTCTGCAGGGGGATATCAAAATGGGATTTCTGATGTGGAATCCCATCGTGGTTATGCAGACTTGCCAAGTGGAAGTGTGCAAAGAGAAGGATTGATGTCCTATAAGCAATTCATTCAGGAGCTTGAGGATGATGTACTACCAGCTGAAGCGGAACGTAGGTATCAAGAATACAGATCAGAGTACATTTCTACCCAAAAACGAGCTTATTTTAATGCTCATAAGGATGAGGAGTGGTTGAAAGATAAATATCATCCAACAAATTTGCTTACAGTCATTGAAAGGAGGAATGAAAATGTTCGACAGCTGGCAAAGGATTTTTTGCTTGATTTGCAAAGTGGAACATTAGACCTAAATCCTGGTTTGACTGCCTCTTCATCCAGCAAATCAGGGCAAGCTAGCGAGCCAAATTCAGAGGAGGAAGCAGACGCTGGAGGTAAACGAAGAAGACATGGTCGGGGATCTTATAAAGAAAATGATTTCTCAGCTGCTCCAAAGGCTCACCCTATCAGTTCTGAACCTAGACGAATACAAGCAGACGTTCAACAGGCTCAGGCCCTTGTTCGTAAGCTTGACAGAGAAAAGGGGATTGAAGATAATATTTTATGCAGAAGTGATCACAATAAAAATGATGATAAAGCTCATGGTGGATCTGTGGGTCCCATAATAATTATACGAGGCCTAACATCTGTTAAAGGTTTAGAGGGTGTTGAGCTTTTAGATACACTTATTACATATCTTTGGCGGATTCATGGTGTAGATTATTATGGCATGATTGAGACTCATGAGGCTAAGGGTTTTAGGCATGTGAGGCCAGAAGGAACAGGGCATGAAGAAACAGGTAAATCAGGGTCTGAATGGGAGAAGAAGCTTGACTCATTTTGGCAGGGAAGGCTGAATGGTCAGGATCCCTTGGAAGTAATGACTGGTAAGGAGAAGATAGATGCTGCAGCAGTTGAAGTGTTGGATCCATATGTTAGAAAAATTAGGGATGAAAAGTATGGATGGAAGTATGGTTGTGGAGCTAAGGGCTGCACAAAGCTTTTTCATGCTGCTGAATTTGTGTACAAACATCTGAAGCTAAAACACCCAGAGCTTGTTGTTGAACAAACTTCAAAAGTGCGTGAGGATCTTTATTTTCAAAATTACATGAATGATCCAGATGCTCCTGGTGGAAAGCCTGTCATGCAGCAACCTCAGAAGGACAAGCCTTTAAAGCGAAGATTAGGTCTTGAGGGCCGCTTGAGAGATGATCGTGGTAATCGTCGAGACCATGATCGCAGTGAGAGAATAAATGATGGAGATAGGCCTGAGAATTCTCCATCCCGTGAAAGGCAGTCTAAAGCACTTGATATGGGAAACCATGATGAAACAATGTATGATACATATGCAGGGCCTGGTGTACCTCCATTTGGCTCAGATATGCCCCCTCCTCCACCAGTATTGATGCCTGTACCTGGTGCTGGGCCATTAGGACCCTTTGTTCCTGCCCCACCAGAAGTTGCAATGCAGATGTTAAGAGATCAAGGAGGACCTTCATATGATGCCTCTGGAAGAAAGATGCGATCTGGCCCTCATATGGGTGGACCAGCACCTATAATTGCTGTTCCTCCGACTTTTAGACCAGATCCTCGGCGGATGCGAAGTTATCAAGATCTCGATGCCCCAGAGGATGAGGTCACTGTGATAGACTATCGGAGTTTGTAG 2142 0.4697 MAEVISNIPSDSLDKSPSSSAPPPPPPPPPPPHPQSDSDLPPPLPPPRRRDRRDERDFDRPRRDYYDRDRDFKRRRSPSPPHRDRRYSPPLRRSPPPYKRSRRGSPRGGYGPDDRLGYDYYGGYERGVGGRAGYVDDKPYGRFGHRSAGGYQNGISDVESHRGYADLPSGSVQREGLMSYKQFIQELEDDVLPAEAERRYQEYRSEYISTQKRAYFNAHKDEEWLKDKYHPTNLLTVIERRNENVRQLAKDFLLDLQSGTLDLNPGLTASSSSKSGQASEPNSEEEADAGGKRRRHGRGSYKENDFSAAPKAHPISSEPRRIQADVQQAQALVRKLDREKGIEDNILCRSDHNKNDDKAHGGSVGPIIIIRGLTSVKGLEGVELLDTLITYLWRIHGVDYYGMIETHEAKGFRHVRPEGTGHEETGKSGSEWEKKLDSFWQGRLNGQDPLEVMTGKEKIDAAAVEVLDPYVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVYKHLKLKHPELVVEQTSKVREDLYFQNYMNDPDAPGGKPVMQQPQKDKPLKRRLGLEGRLRDDRGNRRDHDRSERINDGDRPENSPSRERQSKALDMGNHDETMYDTYAGPGVPPFGSDMPPPPPVLMPVPGAGPLGPFVPAPPEVAMQMLRDQGGPSYDASGRKMRSGPHMGGPAPIIAVPPTFRPDPRRMRSYQDLDAPEDEVTVIDYRSL* 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02434 713 MobiDBLite consensus disorder prediction 527 604 - -
Rops3g02434 713 ProSitePatterns Zinc finger C2H2 type domain signature. 485 508 IPR013087 -
Rops3g02434 713 Pfam Arsenite-resistance protein 2 425 612 IPR007042 -
Rops3g02434 713 MobiDBLite consensus disorder prediction 1 117 - -
Rops3g02434 713 MobiDBLite consensus disorder prediction 265 326 - -
Rops3g02434 713 MobiDBLite consensus disorder prediction 265 282 - -
Rops3g02434 713 PANTHER ARSENITE-RESISTANCE PROTEIN 2 48 711 IPR039727 GO:0006397
Rops3g02434 713 MobiDBLite consensus disorder prediction 285 302 - -
Rops3g02434 713 MobiDBLite consensus disorder prediction 545 600 - -
Rops3g02434 713 SUPERFAMILY Formin homology 2 domain (FH2 domain) 22 32 - -
Rops3g02434 713 MobiDBLite consensus disorder prediction 18 43 - -
Rops3g02434 713 MobiDBLite consensus disorder prediction 44 90 - -
Rops3g02434 713 Pfam SERRATE/Ars2, N-terminal domain 181 263 IPR021933 -
Rops3g02434 713 MobiDBLite consensus disorder prediction 653 699 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02434 Rops-Chr3 49730416 49741071 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02434 45 713 C2H2 Transcription Factor Family AT2G27100 63.953 0.0 759
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02434 K27103 - gmx:100811300 998.038