Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02433 ATGGATGTTGAAGCAGTAGATGAAGGGGAAAACAGTGATAGACCTGCTTCTGAAAATGTTGAAACTGAAAAAGGCCAGGTTCAAATTATGACTGTAAACTTGGCTGAAAGAGAAGTAAATAATCAGGACGGTGAAGCGTATAAGAAACCACAAGTGGGCATGCTGTTTGAATCTGAAGATGCTGCAAAATCATTTTATGATGCATATGCAAGACATGTAGGATTTAGCATCCATGTTGGTCAATTTAGTCGTGCTAAGCCTGATGGTCCAATTATAACTTGGGACTTTGCTTGTTCCAGGGAGGTATTTAAAAGGAAGAATGTTGTATGTTGCAATGCAATGCTTAGGATAGAAAGAAAAGATGCAAACTGGATTGTGACAAAATTTGTTGAGGACCATAACCATTCCCTGACTTCCTCTAAAAAGGTGCAGTACCTTCGACCCCGTAGGCATTTTGCAGGAGCTACGAGGAATGTTGCAGAGACATTTGATGCCGCAAAAGTCACACCTCCAAGCACTCAGGGTAACGGAATCAGTCAGGAAGAAATTAGCAGGAAGAGCCCTTCGTCAATTTCTGAAGTCTTCCCATCATTGTGGCCTTGGCAAGATTCAGTGACACATCACTTTAATCTTAATGACATTGGACTTCCTGTTACTGATCTGAATCATCCTAGTATGGCTCCAGTTTCTATTCACCGGGATGGTGGCCCTCCAGCTAACATTGCTGTCCTTACTTGTTTCAAGTCTATGACTTGGGTTATAGAAACTAAGAATTCAAGCCCATCCAGTAAAGTTGCAGTAATCAACATGAAGCTGCAAGATTATGGCAAGAGCCCTTCGGGAGACACAGAAGTGCAATTCAGGGTGACGAGGATCACTTTGGAGCCCATGTTGAGGTCTATGGTTTACATCAGTCAGCAGCTCACTGCACCAGTCAATAGAGTTGCTGTCATCAATCTGAAGCTCCAGGATACAAAAACAAGTACTGGGGAAACAGAGGTGAAATTCCAAGTGTCTAGAGATACGCTAGGTTCCATGCTGAGATCTATGGCCTACATCAGGGAGCAGCTATAA 1074 0.4283 MDVEAVDEGENSDRPASENVETEKGQVQIMTVNLAEREVNNQDGEAYKKPQVGMLFESEDAAKSFYDAYARHVGFSIHVGQFSRAKPDGPIITWDFACSREVFKRKNVVCCNAMLRIERKDANWIVTKFVEDHNHSLTSSKKVQYLRPRRHFAGATRNVAETFDAAKVTPPSTQGNGISQEEISRKSPSSISEVFPSLWPWQDSVTHHFNLNDIGLPVTDLNHPSMAPVSIHRDGGPPANIAVLTCFKSMTWVIETKNSSPSSKVAVINMKLQDYGKSPSGDTEVQFRVTRITLEPMLRSMVYISQQLTAPVNRVAVINLKLQDTKTSTGETEVKFQVSRDTLGSMLRSMAYIREQL* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02433 357 MobiDBLite consensus disorder prediction 1 25 - -
Rops3g02433 357 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 4 181 - -
Rops3g02433 357 Pfam FAR1 DNA-binding domain 64 138 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02433 Rops-Chr3 49711436 49718919 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Rops3g02433 FAR1 3.3e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02433 - - gmx:100789242 325.094