Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02429 ATGATGGTCCTCCACAGAGGATGGGAGCCCCTTTCTATTGTTGAGGTCACTGAAGAGGGTCGTGAGGTTTCTCAGTCGGCTAAAGATAAAGCCATGGAAGCTATTTCTAAAGTAACTCGTATTGAGGCTTCCAATCCTCATGACATGACTGGAGAAACTGGAACCCTTGGTTACATGGCTCCTGAGGTTCTAAATGGTAGTGCATACAATAGAAAGTGTGATGTGTACAGTTTTGGCATATGCTTATGGGAGATATACTGCTGTGACATGCCATATCCTGACCTTAGTTTCTCAGAAGTAACATCAGCTGTCGTACGACAGAATCTGAGGCCGGAGGTTCCACGATGTTGTCCAAGCTCTCTGGCAAATGTGATGAAAAGATGCTGGGATGCCAATCCTGATAAGAGGCCATGA 414 0.4565 MMVLHRGWEPLSIVEVTEEGREVSQSAKDKAMEAISKVTRIEASNPHDMTGETGTLGYMAPEVLNGSAYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEVPRCCPSSLANVMKRCWDANPDKRP* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02429 137 ProSiteProfiles Protein kinase domain profile. 1 137 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g02429 137 SUPERFAMILY Protein kinase-like (PK-like) 47 137 IPR011009 -
Rops3g02429 137 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 37 137 - -
Rops3g02429 137 Pfam Protein tyrosine and serine/threonine kinase 44 137 IPR001245 GO:0004672|GO:0006468
Rops3g02429 137 Gene3D Transferase(Phosphotransferase) domain 1 22 137 - -
Rops3g02429 137 SMART tyrkin_6 1 137 IPR020635 GO:0004713|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02429 Rops-Chr3 49600267 49600952 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02429 38 137 MAP Kinase Kinase Kinase AT3G22750 81.000 4.59e-62 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Rops3g02429 PK_Tyr_Ser-Thr 4.6e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02429 - - cit:102623802 216.853