Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02423 ATGGTGGCTGGTGCTTGTTCCTCTGTTATCACTACTCCCATAGATACTGTAAAAGCACATCTTCAGGTTATGGACAATTATGATTCTGGAAGACCATTAGTACTGAAGACAGCAAAGACTCTCCTTAAGGAAGATGGATGGCTTCATTCTGATACAATTAAGCCCAGCAGTGAACCGTATCATCAGTCTTCTACTGGTAGAAGATCTAATGCAGGATTTATTTCCATTTCAACGAAAGATTTCAGGAGCCTTGTTTATGCAGAGGACTGTTTGCTGGATTTGTTCCCCTTGCAAGTTAGGATATTTGTTTCATGGGAAGCCAATTCATTGGTGACAATGATAACCCAAATGGTCCAATTAATGATTTGCTTGTTTTCTTTTCCTGGATGCTATGGGTTCCTGGAGCAAGGCTTGTGGCACCAAGAATGTTTAAAGATGAAACTGGCTAATTTTGCTCCTCAGTTTAGTGGTTATAGCCAACATGACTCTCAAATGCAGACTTATATTGTGTACGAGGGAAACCAGCCAAGTGGAGACGTTCCCAATTCAATTCTTCAAATGAACATGCTCCAAAAGCACTTGGCAGGTATTAGCTGA 597 0.4087 MVAGACSSVITTPIDTVKAHLQVMDNYDSGRPLVLKTAKTLLKEDGWLHSDTIKPSSEPYHQSSTGRRSNAGFISISTKDFRSLVYAEDCLLDLFPLQVRIFVSWEANSLVTMITQMVQLMICLFSFPGCYGFLEQGLWHQECLKMKLANFAPQFSGYSQHDSQMQTYIVYEGNQPSGDVPNSILQMNMLQKHLAGIS* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02423 198 Pfam Mitochondrial carrier protein 1 47 IPR018108 -
Rops3g02423 198 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 47 - -
Rops3g02423 198 SUPERFAMILY Mitochondrial carrier 2 47 IPR023395 -
Rops3g02423 198 Gene3D Mitochondrial carrier domain 1 49 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02423 Rops-Chr3 49502951 49509547 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02423 1 47 Chloroplast and Mitochondria Gene Families AT5G15640 51.064 1.93e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02423 K15121 - gmx:112997745 88.5817