Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02408 ATGGGGTTTACAGAAACACCTAAACATGTGCACACAGATGCTGTCAAGATTATTGCATTAGTTTTGTTATTGCCACAAAAGACAGCTTTGGATAAAACCTTTGGATTTGATACTGCTGTTGAAGAAGCACAAAGAGCAATAAACTATGCATACATTGAGGTGTTGATACGCCTGATTGGTGCGGATGAGCATATGTATGTAAATCATGTGGACGCAATGCAGTGGATTGAAAACACTGATGTGCTTGAGATGATTGTGGACAAGTTCAGTTCTTCAGCTCATGCTTATTATGGTTTTGGACCCTTGAGCTTTTGTCTATCTGTGAACTACTTGGATCGCTTCCTATCAGTTTTTGAGTTACTGATCACTTGTGAGAAGCCTCCAGGAAAGTCATCCATTTCAAGATCAGTTCAGCTCATCCTTAGCATAATCAGAGGCATTGACTTCTTGGAATTCAACTTTGTGACGCCTATGTCATTCCCACAAGCTGGCAAATCTAATGGGAATTTCCAGCTTCATCACGAATTCCTGATTTGTCAATCTCGGCTTGTGTTCCTGTATTACCTTCATATAATAAAGAAGATAATTGTTTTGGCTCCACTTCCCATTGGATTTGTTGTGTTCATGGTTCATTTGGCCACCATCCCAGTCACTGGTACCGGTATTAACCCACCTAGGAGTCTAGGAGCTGCTGTTATCTACAACCAAGACAAGCCTTGGGATGACCATTGGATCTTTTGGGTTGGACCATTCGTTGGAGCAGCCATTGCAGCCTTCTACCACCAATTCATCTTAAGAGCTGATGCAGTTAAGGCTCTTGGATCATTCAGGAGCAACCCTACTGTTTAA 849 0.4181 MGFTETPKHVHTDAVKIIALVLLLPQKTALDKTFGFDTAVEEAQRAINYAYIEVLIRLIGADEHMYVNHVDAMQWIENTDVLEMIVDKFSSSAHAYYGFGPLSFCLSVNYLDRFLSVFELLITCEKPPGKSSISRSVQLILSIIRGIDFLEFNFVTPMSFPQAGKSNGNFQLHHEFLICQSRLVFLYYLHIIKKIIVLAPLPIGFVVFMVHLATIPVTGTGINPPRSLGAAVIYNQDKPWDDHWIFWVGPFVGAAIAAFYHQFILRADAVKALGSFRSNPTV* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02408 282 Pfam Major intrinsic protein 171 261 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops3g02408 282 SUPERFAMILY Cyclin-like 84 119 IPR036915 -
Rops3g02408 282 SUPERFAMILY Aquaporin-like 183 267 IPR023271 -
Rops3g02408 282 PRINTS Major intrinsic protein family signature 244 264 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops3g02408 282 PRINTS Major intrinsic protein family signature 204 226 IPR000425 GO:0015267|GO:0016020|GO:0055085
Rops3g02408 282 Gene3D Glycerol uptake facilitator protein. 164 282 IPR023271 -
Rops3g02408 282 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 194 269 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02408 Rops-Chr3 49166859 49178303 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02408 197 282 Major Intrinsic Protein MIP AT3G54820 83.721 3.63e-47 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02408 K09872 - gmx:100817292 169.474