Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops3g02401 | ATGGCAAAACCAGTTTCTCATTCACATCTACTCCTTGTAATCTTGTTTCTTTCCATGCATCTTACAGAACAGTTACAATTTTCTCAGTCTCAGTCACTTCTCAAAGTTCAGCAACTTCTTGGTTATCCATCAGCACTAGGCAGCTTAAGCAGCACCGCAGACTATTGCAACATTGAACCTACCTCATATTTGACACTAGTGTGCTATGAGGATAATTTGAGTCAGTTGCATGTTGTTGGCAACAATGAGTTTACTCCATTGCCTCAAGACTTCTCTTCAGACACTCTATTTGCCACACTAGGGGGTCTATCAAGCTTGAAAGTCCTCACTTTGGTTTCTCTTGGTCTTTGGGGTCCTCTACCTGAAAGCATTGGTCAATTGTCTTCTTTGGAAATACTTAACATTAGCTCAAATCACTTCAATGGAGCCATCCCAGTTCAACTTTCACATCTGAGGGACTTGCAGTCAGTGGTACTTGATGATAACAACTTCAGTGGTGAAATTCCCAACTGGGTTGGCTCACTTCAAGGTTTGGCTGTGCTTAGTATGAAGAAGAATTGGTTTAGTGGGAGCTTACCAATTTCAGTGAATACCCTTCTTACTCTGAGAGTGTTAGATCTATCAAATAATCAGCTATCTGGGGAACTACCTCATCTTCACAATTTGGCAAACCTTCAAGTTCTTCACTTAGAAAACAACACATTTGGACCTCATTTTCCTTCTCTGCCTACCAAGTTAGTTTCTCTTGTGCTTAGAAACAATAGCTTTAGGCTTGGGATCCCTTCTAATTTAAGTTCTTTCTATCAGCTCCAAAAGCTGGACCTTTCATTGAATGGTTTTGTGGGGCCATTTCTGCCATATTTATTGTCACTGCCTTCCATCAATTACCTTGATATTTCTTCAAATAAACTCACTGGGATGCTTTTCAAGAATTTGTCATGCAATGATGATCTCAACTTTGTAAATATATCTTCAAATCTTTTGAAAGGGGAACTTCCCACTTGTTTAAGTCCAAAATCCAAGGTTGTTTTGTATGCTAGAAACTGTTTATCAAATGAAGATCAGCACCCTTCCGATTTCTGCAGCAATGAGGCTCTTGCAGTGAATATCATACCCCAACATCAGAAGCATAAAAGAACAACAAGTAAAACAGTGTTTGTATCAGGTATGGGAGGTGTTTTTGTTGGAGTACTAATTGTTGGAGTTGTTATCTTGGTCATTAGCCAGGTTCATAAAAAACAAGTTGTGAAAACACCTTCAATGTCCACATTGGAGCATGTTATTAGTCAGGTACACAAAGAGGATGAAGAGAAAACTTCTACAAGGTCCATTATGGAACATATCATCAAAAGGGTTCCTGACAAACAGGCTGTGAAAACACTAACAAGATCCATAAAGGAGCATGTCATGAGCCGAGTGAATAACAAACGTGTAGCAAAAACACCTACAAGGTCTATAATAGAGTGTGTATCATCGGTTAACACTGCAAAACTACTCAAAGATGCAAGATATATATCACAAACAATGAAGATGGGAGCCAGCCTTCCTGCTTATAGGACCTTTGCTTTGGATGAACTTAAGGAAGCTACAAATAATTTTGATCCATCATGTCTTATAAGTGAAGGTCCACATGGTCAGATATATAAAGGGTTGCTCTCTGATGGAATGCATATTGCTATAAGAGGTGTGAAAATTAGAAAGAGACACAGCCCTCAAACCTATATGCACCATGTTGAGTTGATTTCCAAACTAAGGCATTCACACTTGGTTAGTGCTCTTGGGCATTCTTTTGAGTGCAACCAGGATGATTCAAGTGTCAACACTATATTTCTCATATTTGAGTATATTCTAAATAGAAGTTTAAGAAGCTGTGTTTCTGGACCTTCTGGTGAAAAGCTTTCTTGGACACAGAGAATAGCAGCTGCAATTGGTGTGGTGAAAGGGATTCAATTTTTGCACACAGGGATAGTTCCAGGACTATATTCAAATAATCTGAGGATAACAGATATTCTTTTGGATAACAATCATAATGTTAAAATAAGCAGTTATAATCTGCCACTCTATGCTGAAAACAAAAGATTGGTCAGTAATGGAACTTCCCCTGGATTAAAAGGAAATCCCCAAGCAAGGATAAAGGATGCAGACAAGAATGATGTCCATGACATTGGAGTAATCTTGCTAGAAATCATCCTGGGACGACCATTAATGTTCCACAATGAATTACAAGTAAGCATCAAAACTGATGATATAGCTAGAAGGAGTATTGTTGACCCAGTAGTTCATAAGGAATGTTCAGATGAATCATTAATGACAATGATGGAGATATGTGTAAGGTGTCTCTCTAGTGAACCAACTGATAGGCCTTCTGTGGAAGATGTTTTATGGAATTTGCAGTTTGCTGCACAAGTTCAGAATACATGGAGAAGAGACTCAAATGATCATAGAGACTCTCCTGCATCATCTTCCAGGGACACATAA | 2478 | 0.3866 | MAKPVSHSHLLLVILFLSMHLTEQLQFSQSQSLLKVQQLLGYPSALGSLSSTADYCNIEPTSYLTLVCYEDNLSQLHVVGNNEFTPLPQDFSSDTLFATLGGLSSLKVLTLVSLGLWGPLPESIGQLSSLEILNISSNHFNGAIPVQLSHLRDLQSVVLDDNNFSGEIPNWVGSLQGLAVLSMKKNWFSGSLPISVNTLLTLRVLDLSNNQLSGELPHLHNLANLQVLHLENNTFGPHFPSLPTKLVSLVLRNNSFRLGIPSNLSSFYQLQKLDLSLNGFVGPFLPYLLSLPSINYLDISSNKLTGMLFKNLSCNDDLNFVNISSNLLKGELPTCLSPKSKVVLYARNCLSNEDQHPSDFCSNEALAVNIIPQHQKHKRTTSKTVFVSGMGGVFVGVLIVGVVILVISQVHKKQVVKTPSMSTLEHVISQVHKEDEEKTSTRSIMEHIIKRVPDKQAVKTLTRSIKEHVMSRVNNKRVAKTPTRSIIECVSSVNTAKLLKDARYISQTMKMGASLPAYRTFALDELKEATNNFDPSCLISEGPHGQIYKGLLSDGMHIAIRGVKIRKRHSPQTYMHHVELISKLRHSHLVSALGHSFECNQDDSSVNTIFLIFEYILNRSLRSCVSGPSGEKLSWTQRIAAAIGVVKGIQFLHTGIVPGLYSNNLRITDILLDNNHNVKISSYNLPLYAENKRLVSNGTSPGLKGNPQARIKDADKNDVHDIGVILLEIILGRPLMFHNELQVSIKTDDIARRSIVDPVVHKECSDESLMTMMEICVRCLSSEPTDRPSVEDVLWNLQFAAQVQNTWRRDSNDHRDSPASSSRDT* | 826 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops3g02401 | 825 | ProSiteProfiles | Leucine-rich repeat profile. | 201 | 223 | IPR001611 | GO:0005515 | |
Rops3g02401 | 825 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED | 106 | 815 | - | - | |
Rops3g02401 | 825 | Gene3D | Phosphorylase Kinase; domain 1 | 492 | 615 | - | - | |
Rops3g02401 | 825 | FunFam | Probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 | 244 | 366 | - | - | |
Rops3g02401 | 825 | ProSiteProfiles | Protein kinase domain profile. | 533 | 799 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops3g02401 | 825 | SUPERFAMILY | Protein kinase-like (PK-like) | 513 | 799 | IPR011009 | - | |
Rops3g02401 | 825 | Pfam | Leucine Rich repeats (2 copies) | 202 | 233 | IPR025875 | - | |
Rops3g02401 | 825 | FunFam | Putative inactive leucine-rich repeat receptor-like protein kinase | 507 | 615 | - | - | |
Rops3g02401 | 825 | PRINTS | Leucine-rich repeat signature | 202 | 215 | - | - | |
Rops3g02401 | 825 | PRINTS | Leucine-rich repeat signature | 291 | 304 | - | - | |
Rops3g02401 | 825 | FunFam | LRR receptor-like serine/threonine-protein kinase ERECTA | 97 | 192 | - | - | |
Rops3g02401 | 825 | FunFam | Putative inactive leucine-rich repeat receptor-like protein kinase | 616 | 813 | - | - | |
Rops3g02401 | 825 | Pfam | Protein tyrosine and serine/threonine kinase | 539 | 794 | IPR001245 | GO:0004672|GO:0006468 | |
Rops3g02401 | 825 | Gene3D | Ribonuclease Inhibitor | 28 | 148 | IPR032675 | - | |
Rops3g02401 | 825 | Gene3D | Transferase(Phosphotransferase) domain 1 | 617 | 822 | - | - | |
Rops3g02401 | 825 | SUPERFAMILY | RNI-like | 66 | 351 | - | - | |
Rops3g02401 | 825 | Gene3D | Ribonuclease Inhibitor | 149 | 240 | IPR032675 | - | |
Rops3g02401 | 825 | Gene3D | Ribonuclease Inhibitor | 241 | 355 | IPR032675 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops3g02401 | Rops-Chr3 | 49080285 | 49085792 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops3g02401 | 42 | 822 | Miscellaneous Gene Families | AT3G03770 | 47.930 | 0.0 | 635 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-VI-1 | Rops3g02401 | PK_Tyr_Ser-Thr | 1.4e-14 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops3g02401 | - | - | gmx:100797327 | 1319.29 |