Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02326 ATGTTGATATTAGTTCTTGGACTAGCTTCAGCTACTTTTTTAGTGATTGTTGCACTTTATTATGTCTTCTTTTACCTGAAAAGATCATCAAAATATGAGAGCAAAGACATAGAAAGTTCAGAACCAAAGCAGGAAGAGATGGTTCAGAAGGAGGACTTGATCATCTTTCAAGGTGGGGAGGACTTGACAATATGTGACATATTGGATGCTCCAGGTGAAGTGATTGGAAAATCCAATTATGGGACACTGTATAAGGCTTTGTTGCAAAGGAGCAACAAAGTGAGGTTGCTGAGGTTTTTGAGACCAGTATGTACTACAAGAGCTGAAGAATTGGATGAAATGATTCAGTTTCTTGGAAAGATAAGGCATCCTAATTTGGTTCCTCTTCTTGGATTTTACACTGGGCCAAGGGGTGAGAAGCTTCTTGTTCATCCTTTCTATAGGCATGGGAATCTGATTCAATTCATAAGAGATGGAAATGGAGAGTGTTACAAATGGTCTAACATATATAGAATATCCATTGGTATAGCCAAAGGATTAGAGCATCTTCACACAGGACATGAGGAGCCAATTATCCATGGAAACCTCAAGTCTAAGAACATCCTTTTGGACAGGTCCTACCAACCATACATCTCAGATTCAGGTCTTCATCTTCTGTTGAATCCTACTGCTGGTCAAGAAATGCTTGAAAGTTCAGCTGCTCAAGGTTATAAGGCACCTGAGCTTATCAAAATGAAGGATGCTAGTGAAGAGACTGATATATATAGCCTTGGTGTGATCTTGCTTGAATTACTTTCAGGGAAGGAACCTATCAATGAGCATCCAACCCCTGATGAGGATTTCTATTTGCCAAATTTCATGAGAAATGCTGTACTTGGACACAGAATTGCTGATTTGTACCATCCAGCCATTCTTCTCCAAAACAGCAGAGATGATAAAATTCAAGTTACAGAAGATTGCATTCTCAAATTTTTCCAACTTGCTATGGCTTGTTGCTCACCTTCACCTTCAATTAGACCTAACATAAAGCAAGTCCTTAGGAAGCTTGAAGAAATTGTACACTAG 1065 0.3906 MLILVLGLASATFLVIVALYYVFFYLKRSSKYESKDIESSEPKQEEMVQKEDLIIFQGGEDLTICDILDAPGEVIGKSNYGTLYKALLQRSNKVRLLRFLRPVCTTRAEELDEMIQFLGKIRHPNLVPLLGFYTGPRGEKLLVHPFYRHGNLIQFIRDGNGECYKWSNIYRISIGIAKGLEHLHTGHEEPIIHGNLKSKNILLDRSYQPYISDSGLHLLLNPTAGQEMLESSAAQGYKAPELIKMKDASEETDIYSLGVILLELLSGKEPINEHPTPDEDFYLPNFMRNAVLGHRIADLYHPAILLQNSRDDKIQVTEDCILKFFQLAMACCSPSPSIRPNIKQVLRKLEEIVH* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02326 354 ProSiteProfiles Protein kinase domain profile. 69 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g02326 354 SUPERFAMILY Protein kinase-like (PK-like) 72 350 IPR011009 -
Rops3g02326 354 Gene3D Phosphorylase Kinase; domain 1 64 146 - -
Rops3g02326 354 Pfam Protein tyrosine and serine/threonine kinase 72 349 IPR001245 GO:0004672|GO:0006468
Rops3g02326 354 Gene3D Transferase(Phosphotransferase) domain 1 148 354 - -
Rops3g02326 354 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 30 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02326 Rops-Chr3 46855998 46858899 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02326 36 352 Carbohydrate Esterase AT5G61570 61.538 3.66e-139 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Rops3g02326 PK_Tyr_Ser-Thr 2.5e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02326 - - gmx:100788898 634.024