Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02320 ATGGATGAGCCTGGACTGGATTTACTATCTCAAATGTTGCAATATGAACCTTCGAGGCGGCTTTCTGCAAAGAAAGCTATGGAACACTATTACTTCGATGACCTGGACAAAGATCTTGCGCCCTGTGCAGTGGCATCCTGTGTTGTCTATGTTGAAGGACCTGCTCAGCCTACTGGCGGAGCTGCTGCTATTGCCATGCTGATTGGTCCTAATGCTCCCATTGCTTTTGAAAGCAAATTGAGGGGAAGTCATATGTCTCATGCCTATGACTTTTACAAGCCTAATCTTGCAAGTGAATATCCGGTTGTTGATGGGAAGCTTTCTCAAACCTGTTACCTCATGGCCCTTGATTATTGCTATAAACATTTAAGTCACAAATATGAGAAACTCGAGGGCAAACAATTTTCTATGGCTGATGCTGAATTCTTTGTATTTCACCCTCCTTATAACAAGCTTGTACAGAAAAGTTTTGCTCGTTTGGTGTTCAATGACTTCTTGAAGAATCCCAGTTTTGTGGATGAGAATGCCAAAGAAAAGCTGGGACCTTTTGCAACATTATCTGGTGATGAGAGCTATCAAAGCCGTGATCTAGAAAAGACATCCCAACAAGTTGCAAAGCCTCTATACGATACCAAGGTGCTACCAACCACTTTGGTACCAAAACAAGTTGGAAACATGTACACTGCATCCCTCTATGCAGCATTTATTTCGCTTATTCACAACAGACATAGCACATTGGCAGGTAAGAGGGTGATACTATTCTTTTATGGAAGTGGGTTCACTGCCATAATGTTCTCCTTGCAATTACGTGATGGTCAACATCCATTAAGCTTGTCAAACATCGCTGAAATGATGGATATTGCTGGAAAATTGAAATCAAGACATGAGTTTCCTCCGGAGAAGTTTGTTGAAGTCATGAAGCTAATGGAACATAGGTATGGCGCCAAGGAGTTTGTAACAAGCAAAGCAAGGACACTAGCCTTTTATCTCGAGGCACATTCTATCTCACTGACGTTGACGCATGTATGA 1029 0.4208 MDEPGLDLLSQMLQYEPSRRLSAKKAMEHYYFDDLDKDLAPCAVASCVVYVEGPAQPTGGAAAIAMLIGPNAPIAFESKLRGSHMSHAYDFYKPNLASEYPVVDGKLSQTCYLMALDYCYKHLSHKYEKLEGKQFSMADAEFFVFHPPYNKLVQKSFARLVFNDFLKNPSFVDENAKEKLGPFATLSGDESYQSRDLEKTSQQVAKPLYDTKVLPTTLVPKQVGNMYTASLYAAFISLIHNRHSTLAGKRVILFFYGSGFTAIMFSLQLRDGQHPLSLSNIAEMMDIAGKLKSRHEFPPEKFVEVMKLMEHRYGAKEFVTSKARTLAFYLEAHSISLTLTHV* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02320 342 Gene3D Transferase(Phosphotransferase) domain 1 1 42 - -
Rops3g02320 342 SUPERFAMILY Thiolase-like 74 326 IPR016039 GO:0016746
Rops3g02320 342 Gene3D - 43 338 IPR016039 GO:0016746
Rops3g02320 342 Pfam Hydroxymethylglutaryl-coenzyme A synthase C terminal 74 323 IPR013746 GO:0004421|GO:0006084|GO:0010142
Rops3g02320 342 PANTHER 3-HYDROXY-3-METHYLGLUTARYL COENZYME A SYNTHASE 49 322 - -
Rops3g02320 342 Pfam Hydroxymethylglutaryl-coenzyme A synthase N terminal 43 73 IPR013528 -
Rops3g02320 342 NCBIfam hydroxymethylglutaryl-CoA synthase 45 321 IPR010122 GO:0004421|GO:0008299
Rops3g02320 342 SUPERFAMILY Protein kinase-like (PK-like) 2 36 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02320 Rops-Chr3 46729034 46730142 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02320 1 35 Core Cell Cycle Gene Families AT1G20930 77.143 2.44e-11 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02320 K01641 - gmx:100780554 490.345