Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02274 ATGGCATCACTTAACAAACAACTTTTGTTTCTCTTATTTCTTATGGTGGTCCTTGATCCTACTTTCACATATGCATTACCCAAAACACATGTGCGCATTTTCAATCATCTAGGTGGTAAAGATGGGAACCCAAATCTCACTGTTCATTGCAAATCCAAAAATGATGATATAGGCTCTCATGTGATTTCTGTTGATCAGTATTTTGAATGGAGCTTCCATCCTAATTGGGGTGGTGATAACACATTATTCTTTTGTCATTTATCATGGAGAGGAGGTGCAGGAAGATATGATATCTATAAAGAGAAAAGGGACCGCGATAGGTGCGTGACTCATTGTGACTGCGAGCAGAGCTCTGACATTAATGGTATTAAGAATGTGTCTGCTAATCTCCTTGGAGTAAACCTAGAGGATCAGAATGCCGTCGTCATCGGGGGTGTCTGGGGAAGAGGCTGCGAAGAAGGACACGTCCTCGATCTGGGGTGCAACGACAACGGTGTCATCGGCAGACATCATGCCATAATGCTTGGAGAGCACTGA 537 0.432 MASLNKQLLFLLFLMVVLDPTFTYALPKTHVRIFNHLGGKDGNPNLTVHCKSKNDDIGSHVISVDQYFEWSFHPNWGGDNTLFFCHLSWRGGAGRYDIYKEKRDRDRCVTHCDCEQSSDINGIKNVSANLLGVNLEDQNAVVIGGVWGRGCEEGHVLDLGCNDNGVIGRHHAIMLGEH* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02274 178 PANTHER - 26 108 IPR010264 -
Rops3g02274 178 Pfam Plant self-incompatibility protein S1 30 113 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02274 Rops-Chr3 45266771 45271111 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02274 20 106 Carbohydrate Esterase AT3G16970 42.529 1.03e-13 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02274 - - vun:114170110 109.768