Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02263 ATGCTCAAAATCACAGACAATTTCTCAGCTGCTAATAAGCTAGGAGAGGGTGGTTTTGGTCCTGTTTATAAGGGAACTTTAAGTGACAAGCAAGAGGTATCAATAAAGCGACTTTCTAAAAGTTCAGGACAGGGCCTTACAGAGTTTAAGAATGAAGCTAAACTCATGGCCAAACTCCAGCACACTAATCTTGTAAAGCTTTTAGGGTTCTGTATCCAGAGAGATGAAAGAATATTAGTCTATGAGTACATGTCTAACAAGAGCTTAGACTTCTACTTATTTGATTCAACTAGAAAGAATTTGCTAGACTGGAAAAAACGCTTGAACATCATCGGAGGCATCGCTCAAGGACTTCTTTATCTTCACAAGTATTCAAGATTAAAGGTGATACATCGAGACCTGAAAGCAAGCAATATATTACTTGATGAAGAGATGAATCCAAAAATATCTGACTTTGGCATGGCTCGAATATTTGGCCTAAGAGTATCAGAAGAAAACACAAACAGAGTTGTTGGTACATATGGTTACATGGCTCCAGAGTATGCAATAAATGGTGTTGTGTCTATGAAAATAGATGTGTTTAGCTTTGGTGTGCTGCTATTAGAGATTCTTAGTGGCAAGAAGAATAATAGTCACTATCATTTGGATCGCCCACTCAACCTCATAGGATATGCATGGCAGCTCTGGAATGAAGGTAAAGCTCTCGAGCTAGTAGACCCAGCATTAAATGAATTAAGTACCCAGAATGAAGTTATGAGATGTATTCATATTGGCCTGTTGTGTGTACAAGATCAAGCAAAAGATAGACCTACCATGTTAGATATTGTTTCATTTCTATCAAATGATACAATCCAACTTCCCCAACCAAAGCAACCAGCATTCTTCATCAGTGTGGTTGTAGAAGAGTCGGAGCTTCCTTACAGCAGGCAAGAACATCATTCCTTAAATGATGTCACAATTTCTAACATGATAGGAAGATAA 981 0.3802 MLKITDNFSAANKLGEGGFGPVYKGTLSDKQEVSIKRLSKSSGQGLTEFKNEAKLMAKLQHTNLVKLLGFCIQRDERILVYEYMSNKSLDFYLFDSTRKNLLDWKKRLNIIGGIAQGLLYLHKYSRLKVIHRDLKASNILLDEEMNPKISDFGMARIFGLRVSEENTNRVVGTYGYMAPEYAINGVVSMKIDVFSFGVLLLEILSGKKNNSHYHLDRPLNLIGYAWQLWNEGKALELVDPALNELSTQNEVMRCIHIGLLCVQDQAKDRPTMLDIVSFLSNDTIQLPQPKQPAFFISVVVEESELPYSRQEHHSLNDVTISNMIGR* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02263 326 SUPERFAMILY Protein kinase-like (PK-like) 3 307 IPR011009 -
Rops3g02263 326 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 3 322 - -
Rops3g02263 326 PIRSF ILK 2 292 - -
Rops3g02263 326 Pfam Domain of unknown function (DUF3403) 281 326 IPR021820 GO:0004674
Rops3g02263 326 ProSiteProfiles Protein kinase domain profile. 8 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g02263 326 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 84 287 - -
Rops3g02263 326 CDD STKc_IRAK 14 279 - -
Rops3g02263 326 FunFam Os08g0179000 protein 1 83 - -
Rops3g02263 326 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Rops3g02263 326 Pfam Protein tyrosine and serine/threonine kinase 11 279 IPR001245 GO:0004672|GO:0006468
Rops3g02263 326 Gene3D Transferase(Phosphotransferase) domain 1 84 290 - -
Rops3g02263 326 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Rops3g02263 326 SMART serkin_6 8 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02263 Rops-Chr3 44994712 44999188 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02263 5 294 Receptor kinase-like Gene Family AT4G23230 62.069 1.45e-132 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops3g02263 PK_Tyr_Ser-Thr 8.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02263 - - lang:109358482 570.081