Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02250 ATGTTGATTGACATGGAAGATGCAAAAACACAAGAAATCAAAAATTTACAATCTGCTTTGCAAGAGATGCAACTTCAGTTTAAAGAAACTAAGTTATTGCTTCAAAAGGAGCATGAGGCTACAAAAAGAGAAGCAGAGAGAGTGCCTGTCATCTGTTGTTTTGACCATGCTTTGTTGGAGAAGATCACTAATGAAAATAAGAAACTTAAGACCTTGGTGAGTTCAGTGGAAAAGAAAATTGATGTAACACAGAAAAGGTATGAAGAGGCAAATAAACATGACATCATTGTGGAAGCTCTTTCTCAAGATAGTAAGGCAACATTGAGGAGCAGGTTTTCCAGGCCACACAGAGTTATTGGCACTTTTGTAAGCGAGCTTGAAAAGGCTGTTGTAACTCATGGAAAAGAAATTGTCAGGTTTACTCAGCGGAATATACTGAGGGTATCTCTTTGGTTGATGCACGGAATGTTCAAAGCCAATGGTGGATCCGATTATGTTAAAAAACCAGATTTTCTATTAAAAACTGGTCCCAATAATGAGGTCTTTGATCCTAAAGCTCATTTGCCTGTGAAGACTACTTTGAAGGAGAGGGCTTTACTGCCTAGAGATTTGAATGATGTTTAA 624 0.3766 MLIDMEDAKTQEIKNLQSALQEMQLQFKETKLLLQKEHEATKREAERVPVICCFDHALLEKITNENKKLKTLVSSVEKKIDVTQKRYEEANKHDIIVEALSQDSKATLRSRFSRPHRVIGTFVSELEKAVVTHGKEIVRFTQRNILRVSLWLMHGMFKANGGSDYVKKPDFLLKTGPNNEVFDPKAHLPVKTTLKERALLPRDLNDV* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02250 207 Coils Coil 6 33 - -
Rops3g02250 207 Gene3D Phosphatidylinositol (PI) phosphodiesterase 8 186 IPR017946 GO:0006629|GO:0008081
Rops3g02250 207 SMART plcy_3 92 173 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Rops3g02250 207 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 150 172 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Rops3g02250 207 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 149 195 IPR001192 GO:0035556
Rops3g02250 207 Coils Coil 59 93 - -
Rops3g02250 207 SUPERFAMILY PLC-like phosphodiesterases 61 184 IPR017946 GO:0006629|GO:0008081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02250 Rops-Chr3 44816090 44821813 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02250 1 92 Myosins gene family AT4G28710 56.842 7.18e-23 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02250 K10357 K05857 gmx:100791070 131.724