Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02240 ATGGCTGGGAGTAACCAACTTAACCCCAACGACTATAAGACGGTGGTTCCGCTGAACATGTGGGTTCTGATCTCCAATTTCAAGTTAGCATACAATCTTCTTCGTCGTCCAGATGGCACTTTCAACCGTGACTTAGCAGAGTTCCTTGATCGGAAATTTCCTTCAAATGCAAACCCTGTGGATGGAGTGTTCTCTTTTGATGTCATTGTAGACAAGGAAACTAATCTTCTGATTCGAATCTACCGTCCTGCCGAGGGAGAGGAACGCCAGGTGAACATTGTTGACCTTGAGAAGCTTGTGAGTTCTGATGTTGTTCCTGTTCTCATATTCTTTCATGGTGGAAGTTTTGCGCATTCTTCAGCTAACAGTGCTATATATGACACCCTGTTCCGTCGTTCGGTGGGTATATGTAAGAACTTGGCTTCAGAGTAA 432 0.4444 MAGSNQLNPNDYKTVVPLNMWVLISNFKLAYNLLRRPDGTFNRDLAEFLDRKFPSNANPVDGVFSFDVIVDKETNLLIRIYRPAEGEERQVNIVDLEKLVSSDVVPVLIFFHGGSFAHSSANSAIYDTLFRRSVGICKNLASE* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02240 143 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 108 124 IPR002168 GO:0016787
Rops3g02240 143 Gene3D alpha/beta hydrolase 1 142 IPR029058 -
Rops3g02240 143 SUPERFAMILY alpha/beta-Hydrolases 59 134 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02240 Rops-Chr3 44456123 44456652 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02240 1 138 Carbohydrate Esterase AT3G05120 69.784 4.53e-66 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02240 K14493 - gmx:100815161 246.514