Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02239 ATGTGTGGCGGTGCTATCATAGCTGAGTTCATCCCTCGCCATCGTTCTCGCCTCCTTACCGCCTCTGAACTGTGGCCTAACACAGTTGGGAAGCAAGATGAATTGCAGTTAGAACAATCAGCCCCTCTCAAAAGGTCCCAATTACCTTCCCCAGCTAATGAGCAAGTTGAGAAGAAGCCCCCCGAGAAGCTCCAAGATCACTTCAATGACTTTTATGAAGGTCTCTTCGAGGAGCTCAGCAAATACGGCCCAATTCAGAGCTTGAATATTTGTGACAATTTGGTCTCTCCCATGATGTTGCACCACAACTCTCCTCACCTTCATCCAAACTCAAATACAACAGAATCACCAAAGGAAACAAATTATCATCTTTGGAAGTTGAACTAG 387 0.4574 MCGGAIIAEFIPRHRSRLLTASELWPNTVGKQDELQLEQSAPLKRSQLPSPANEQVEKKPPEKLQDHFNDFYEGLFEELSKYGPIQSLNICDNLVSPMMLHHNSPHLHPNSNTTESPKETNYHLWKLN* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02239 128 Gene3D - 28 100 IPR012677 -
Rops3g02239 128 MobiDBLite consensus disorder prediction 38 53 - -
Rops3g02239 128 Coils Coil 124 128 - -
Rops3g02239 128 MobiDBLite consensus disorder prediction 106 121 - -
Rops3g02239 128 MobiDBLite consensus disorder prediction 106 128 - -
Rops3g02239 128 MobiDBLite consensus disorder prediction 38 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02239 Rops-Chr3 44455641 44456027 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02239 1 27 AP2-EREBP Transcription Factor Family AT1G53910 59.259 6.06e-06 42.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02239 K12836 - gmx:100811622 75.0997