Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops3g02228 | ATGTCAATGGAAACAAGAAGGGTCATTAGCCAACAAGAGTCACATCTCTCAGGAATGCGAATACAAATTTGGGTTCAGAATACTCAAGGTGAGATGCAGTGGACAACAGTAGATGGTGTTTATCTCTCACGAACCTTGGATGTGATTCATGTGGAGAACAATGGTAGAGTTTCAGGCATGAGGCCTACAACTCAAGATTCTATTGAAAATCTTGAAAAGATCACAATTGATGGGACACAAGAGTCATCTTCTATGCCTGTGTGTTCCATATGCCTTGAGATGCTTTCAATTGGGTCAAAAGCAATTCGCATGCCCAAACCTTGCTCTCATCTCTATAATCAAGATTGCATCATTAGGTGGCTTAACAGGTCTAACACATGCCCTTTGTGTCGTAGGAGTATCTAG | 405 | 0.4148 | MSMETRRVISQQESHLSGMRIQIWVQNTQGEMQWTTVDGVYLSRTLDVIHVENNGRVSGMRPTTQDSIENLEKITIDGTQESSSMPVCSICLEMLSIGSKAIRMPKPCSHLYNQDCIIRWLNRSNTCPLCRRSI* | 135 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops3g02228 | 134 | PANTHER | SI:CH211-59O9.10 | 56 | 134 | - | - | |
Rops3g02228 | 134 | SMART | ring_2 | 88 | 130 | IPR001841 | - | |
Rops3g02228 | 134 | Pfam | Ring finger domain | 87 | 131 | IPR001841 | - | |
Rops3g02228 | 134 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 49 | 134 | IPR013083 | - | |
Rops3g02228 | 134 | SUPERFAMILY | RING/U-box | 87 | 134 | - | - | |
Rops3g02228 | 134 | ProSiteProfiles | Zinc finger RING-type profile. | 88 | 131 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops3g02228 | Rops-Chr3 | 44193530 | 44193934 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops3g02228 | 27 | 134 | C3H Transcription Factor Family | AT1G49850 | 33.636 | 3.26e-12 | 59.7 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops3g02228 | - | - | lang:109353994 | 107.457 |