Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02213 ATGATGGAACAATCAAGATTCCACAAACAGCCTCAATACAATACCATGGAGCCTAGAAATGAGGAATTCCAGCCTGTATCTCAGTCTGTAATGCAGGACCATCTGGATGGCATGCATACTAATAGAAGACCATCTGACCATAACACATCAAACGTTAAACCAGTACTTAATTATTCAATACAGACGGGTGAGGAATTTGCTCTTGAATTTATGAGAGATAGGGTGAATTTCAGGACTCCTCTATTTTCAAATGTCGGTGATTCCAATTATGCAACTGATTTTATGGAACTGAAAGGCGTTTTAGGCCTCAGTCATGCAGGATCTGAAAGCGGTTCAAACATTTCTATGCTCTCAACGATTGAGAAAGGTCCAACAGAGTTTAACAGACAGAGTACATCATTACATGGAGACAGAAGCAATTATGGGTCAATTCGATCAATACCAAGAACATCACTGAATCAGGAGACTAGTCAATTTGTGCGTGGATATGGCTCTTCTGGTGGTTCTGATAGCACATCAATGATTATGAAGTGTCTTTGTAGCTTTGGTGGTAGAATATTACCACGACCAAGAGATGGAAAACTAAGGTATGTTGGAGGTCAAACACGTATTCTTCGTCTAAGAAAGGACATATCTTGGCAGGAGCTTAGGCAGAAAGCATTGTTAATCTATAATCTGGTTCATGTGCTAAAATATCAACTTCCTGGGGAAGATCTGGATGCTTTGGTATCTGTATCATCTGATGAGGATTTGCAGAATATGATGGAGGAATATAATCTTCTAGAAGACACAGAACGCCCACAAAAGCTTAGGATGTTTTTGTTCTCAATGAGTGATTTGGAAGATGCTCAGTTTTCTATGAGTAGCATTGGTGATGATTCTGAGGTCCAGTATGTTGTTGCTGTTAATGGCATGGACTTGGGATCAAGAAACAACTCAACCCCGCTTGGTGTCAGCTTTTCAGCAAATGATTTACATGAATTGGACAAGCAAGCTATGGAGAGGGATACTAGTAGAGTTGCTGTTGAATCTATAGGTGTCAGCAATGCTCCCTCTACTAATGAATTTGACTCTTCATTGCCCATTCTGTCTTCACAACCTGTGTTACCAACTTCAAATGCTTATGAAACTGATCAACTGTCTTATGGTGACCAAATGATGCAAGTTGGGGAAGCTAGTCGTCAATATCTTGTTCACCATGGTCTTAAGCCCTCTCATTACCCTGGGGTTGGAGAGACTCCTATTTCTACGGCTCCTCATATGCTGAATAATCAACAAGGGATTCTATATGAAGACCATCCACCTAGGGGATTACAAATACAAAATTCAGAATTACCTACAATGCAGGTGAAAAAGATAGGCGATGGTTCAGTTAAACAAGAGAATGACCCTGGTAAAGTTTTATCCTCGGAAACCCCATCCCCAGCTCCCTCACAGCCCTTTGATGGTTACTTGAAAAATAACTGTCCTGAAGCATCAGTTGTAGTTACCATGCCTGATGGGCATCTACCTTCATTGCCTTCAACAAAAAAGGTTCAGCACCAGGATTATGAAGAGGCCTCTTCTACATCTAGCAGTGCATTTGATCCTGCTTATGCTGATTCCCGCTCCAATGCAATTGATTTGAGTTGTCTTCATCCTCCCCCACTTCCTAAAAGAGTTTACTATTCAGAAAGAACTCCCAGGGAGCAAGTAGAGGTCCTGAACCGGTCCTCGAAGTCAGATGACACACATAGCTCTCAGTTTAATGTGTCAGATTTACTTTGTGATGTCAAGCCAGAAGATCCAGTATCAGAATCTGGTGACAACTTTCATGATGGTAATCTGTTAAATCCAACTGAAAAATCGAGTATTGCAGCAAAGCCCTTGCCTGCAGATGACCATACAATTGACAATGGGTTTGCCAAACATCAAATGAATAAACCATTGCCTGATACAAACAGTCAGATTAAGTCAAACCTATCTGCGCACACGAATCCTGAGTTGAAGCAGGTGTTACTGAGCAATGAAGGAAATAAAGATGTGGAAACTGGAAATTATCGTAAAGATAATAATATCAAGCCCTTGCTTGATGAAACCAAAACTGAAGATGGTAAATCAGATCCTCCTGCTATGCATCACATTTCCTCTGTTAAGCACCTTGATGATCCAGCGTCCAATCTTCCAGAGATTGATTGGGGTGAGGCCTCTGGGAAGGAGTCTAATGATAATCATGTGGTGGAAGCACTACCTGTTTCTTTAACTGGGAACATAACCAAAGATGTTTCTCAAGATTTTCCCCCAAATGTTTTTTCCAAACAAGCACAAGGTGACATTCTCATTGATATCGATGATCGATTTCCCCGTGAATTGCTTTCTGATATGTATTCTAAAGCAATACTTGCAGAAGATTCCTCCAGCCTACATCCACTATGCACAGATGGAATTGGCTTAAGCGTAAATATGGAAAATCATGAACCTAAACGATGGTCATATTTTCATAAGTTAGCACAAGAAGGGCTTGATAATGTCTCTCTTATCGATCAGGATCATCTTGGTTTTCCACCTGTGATGGGAAAAACTGGAGATAATAGAGCTCATCATGTTACACCTACAACTGATGGAGTTCCTCCAGATCATGAGGATTCCCACCTCAATTTTGGTGAAGAAAATCGGAAGGACTTACATAGAAGGATTGAAATGGAAACCCCTGTTCTGAAGTCTGATTATGATCAATCCCAACTTACGGACACTGAAAGTATGCAGCTTGATGCTATGACGGAAAACCTAAGAGCCCAAGAGTCAGAATATGAGGATGGCAAGTTTGAAACAAAAAATGGCAATCTACCTCCACTTGATCCTTCTTTAGGAGATTTTGATATCAATACTGTGCAGGTCATAAAGAATGAAGATCTTGAAGAGTTGAAGGAACTAGGTTCAGGTACCTTTGGGACTGTGTATCATGGAAAATGGAGAGGAACAGATGTTGCCATTAAAAGAATAAAGAAGAGCTGCTTCACTGGTCGATCATCTGAGCAAGAGAGACTGACTGTGGAGTTTTGGCGGGAAGCTGACATTCTTTCCAAGCTTCATCATCCAAATGTGGTTGCATTTTATGGTGTGGTACAGGATGGACCAGGTGGAACCATGGCCACAGTTACAGAATATATGGTGGATGGTTCTCTTAGGCACGTATTACTTCGCAAGGATAGATATCTTGATCGTCGCAAGAGGCTGATAATTGCAATGGATGCAGCTTTTGGAATGGAATATTTGCACTCAAAAAACATTGTGCATTTTGACTTAAAATGTGACAATTTGCTTGTGAACTTGAAAGATCCTTTACGGCCGATATGCAAGGTTGGTGATTTTGGCTTGTCAAAAATTAAACGAAATACCTTGGTTACTGGTGGTGTGCGGGGGACTCTACCTTGGATGGCACCAGAGCTGTTGAATGGAAGCAGCAACAAGGTCTCAGAAAAGGTTGATGTGTTCTCCTTTGGCATAGTATTATGGGAAATTCTAACTGGTGAGGAGCCGTATGCCAATATGCATTATGGTGCAATCATAGGTGGGATTGTAAATAACACATTAAGGCCAACCATTCCAAGTCACTGTGATTCCGAATGGAGAATACTGATGGAGCAATGTTGGGCACCAAATCCTATAGCCAGGCCTTCCTTCACAGAAATTGCAAGTCGCTTGCGCATTATGTCAGCAGCAGCTAGCCAAACAAAAACACAGGGCCACAAGGCATCTAAATGA 3744 0.4127 MMEQSRFHKQPQYNTMEPRNEEFQPVSQSVMQDHLDGMHTNRRPSDHNTSNVKPVLNYSIQTGEEFALEFMRDRVNFRTPLFSNVGDSNYATDFMELKGVLGLSHAGSESGSNISMLSTIEKGPTEFNRQSTSLHGDRSNYGSIRSIPRTSLNQETSQFVRGYGSSGGSDSTSMIMKCLCSFGGRILPRPRDGKLRYVGGQTRILRLRKDISWQELRQKALLIYNLVHVLKYQLPGEDLDALVSVSSDEDLQNMMEEYNLLEDTERPQKLRMFLFSMSDLEDAQFSMSSIGDDSEVQYVVAVNGMDLGSRNNSTPLGVSFSANDLHELDKQAMERDTSRVAVESIGVSNAPSTNEFDSSLPILSSQPVLPTSNAYETDQLSYGDQMMQVGEASRQYLVHHGLKPSHYPGVGETPISTAPHMLNNQQGILYEDHPPRGLQIQNSELPTMQVKKIGDGSVKQENDPGKVLSSETPSPAPSQPFDGYLKNNCPEASVVVTMPDGHLPSLPSTKKVQHQDYEEASSTSSSAFDPAYADSRSNAIDLSCLHPPPLPKRVYYSERTPREQVEVLNRSSKSDDTHSSQFNVSDLLCDVKPEDPVSESGDNFHDGNLLNPTEKSSIAAKPLPADDHTIDNGFAKHQMNKPLPDTNSQIKSNLSAHTNPELKQVLLSNEGNKDVETGNYRKDNNIKPLLDETKTEDGKSDPPAMHHISSVKHLDDPASNLPEIDWGEASGKESNDNHVVEALPVSLTGNITKDVSQDFPPNVFSKQAQGDILIDIDDRFPRELLSDMYSKAILAEDSSSLHPLCTDGIGLSVNMENHEPKRWSYFHKLAQEGLDNVSLIDQDHLGFPPVMGKTGDNRAHHVTPTTDGVPPDHEDSHLNFGEENRKDLHRRIEMETPVLKSDYDQSQLTDTESMQLDAMTENLRAQESEYEDGKFETKNGNLPPLDPSLGDFDINTVQVIKNEDLEELKELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTVEFWREADILSKLHHPNVVAFYGVVQDGPGGTMATVTEYMVDGSLRHVLLRKDRYLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPLRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPSHCDSEWRILMEQCWAPNPIARPSFTEIASRLRIMSAAASQTKTQGHKASK* 1248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02213 1247 MobiDBLite consensus disorder prediction 455 530 - -
Rops3g02213 1247 MobiDBLite consensus disorder prediction 658 674 - -
Rops3g02213 1247 MobiDBLite consensus disorder prediction 463 477 - -
Rops3g02213 1247 MobiDBLite consensus disorder prediction 658 720 - -
Rops3g02213 1247 Gene3D Transferase(Phosphotransferase) domain 1 1053 1247 - -
Rops3g02213 1247 MobiDBLite consensus disorder prediction 1 26 - -
Rops3g02213 1247 Pfam Protein tyrosine and serine/threonine kinase 966 1228 IPR001245 GO:0004672|GO:0006468
Rops3g02213 1247 MobiDBLite consensus disorder prediction 675 713 - -
Rops3g02213 1247 Gene3D - 194 277 - -
Rops3g02213 1247 SMART serkin_6 965 1231 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g02213 1247 CDD STKc_MAP3K-like 971 1228 - -
Rops3g02213 1247 CDD PB1_UP2 179 275 - -
Rops3g02213 1247 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1090 1102 IPR008271 GO:0004672|GO:0006468
Rops3g02213 1247 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 958 1052 - -
Rops3g02213 1247 SUPERFAMILY Protein kinase-like (PK-like) 955 1228 IPR011009 -
Rops3g02213 1247 ProSiteProfiles Protein kinase domain profile. 965 1230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g02213 1247 Gene3D Phosphorylase Kinase; domain 1 958 1052 - -
Rops3g02213 1247 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 195 277 - -
Rops3g02213 1247 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1053 1245 - -
Rops3g02213 1247 PRINTS Tyrosine kinase catalytic domain signature 1084 1102 IPR001245 GO:0004672|GO:0006468
Rops3g02213 1247 PRINTS Tyrosine kinase catalytic domain signature 1155 1177 IPR001245 GO:0004672|GO:0006468
Rops3g02213 1247 PRINTS Tyrosine kinase catalytic domain signature 1199 1221 IPR001245 GO:0004672|GO:0006468
Rops3g02213 1247 PRINTS Tyrosine kinase catalytic domain signature 1047 1060 IPR001245 GO:0004672|GO:0006468
Rops3g02213 1247 ProSitePatterns Protein kinases ATP-binding region signature. 971 996 IPR017441 GO:0005524
Rops3g02213 1247 PANTHER SERINE-THREONINE PROTEIN KINASE 233 1229 - -
Rops3g02213 1247 SMART PB1_new 190 277 IPR000270 GO:0005515
Rops3g02213 1247 MobiDBLite consensus disorder prediction 591 614 - -
Rops3g02213 1247 Pfam PB1 domain 191 275 IPR000270 GO:0005515
Rops3g02213 1247 SUPERFAMILY CAD & PB1 domains 192 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02213 Rops-Chr3 43911415 43929722 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02213 26 633 MAP Kinase Kinase Kinase AT1G16270 37.764 1.11e-91 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Rops3g02213 PK_Tyr_Ser-Thr 3.8e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02213 - - gmx:100817937 1996.48