Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02207 ATGCAACCCCCATTGGTGCAACCAAACACCCCTCCTCTGGTTAACAAGCAAGAGCAAAAAGAAATCTGCTTCTGGAGACAAGCAGCAAGATCACTATGCCTTATCGGGTCTGAGCAATCTAAGGTATCTTGCTATGAGAAGATCAAATACGTAAAAGCTATCGTGAAGCGCCTTGAGGTTTCATTCGACAAACAGGATGCTCTTCTTCTTGCGAGGAAGCTGAAGGCTGAAGCGAGCAAAAAGGATGAAATAGAAAGTCACTTTAAGACAATTCAGGGAGTATATGAAGTGTTGATCGATCCTGTGAAGAGAAGAATTTATGATTCTATAGATGAGTTTGATGACGAGATTCCCACCGACTGTGCACCACAAGATTTCTTCAAGGTGTTTGGCCCTGCTTTTATGAGGAATGGCCGGTGGTCAGTTAATCAACCAATTCCACCACTAGGGGATGATAATACTCCATTAAAAGAAGTTGATAATTTCTACAATTTTTGGTATTCATTCAAAAGCTGGAGAGAGTTTCCCCATGCCGATGAGTTTGATCTTGAGCAAGCTGAATCTCGAGACCATAGGAGGTGGATGGAAAGGCAGAATGCAAAACTGACAGAGAAAGCCAGGAAAGAAGAGTATGCACGGATACGCAATCTTGTTGATAATGCTTATAAGAGAGACCCAAGTCACTGTTGA 690 0.4246 MQPPLVQPNTPPLVNKQEQKEICFWRQAARSLCLIGSEQSKVSCYEKIKYVKAIVKRLEVSFDKQDALLLARKLKAEASKKDEIESHFKTIQGVYEVLIDPVKRRIYDSIDEFDDEIPTDCAPQDFFKVFGPAFMRNGRWSVNQPIPPLGDDNTPLKEVDNFYNFWYSFKSWREFPHADEFDLEQAESRDHRRWMERQNAKLTEKARKEEYARIRNLVDNAYKRDPSHC* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02207 229 SUPERFAMILY Chaperone J-domain 82 135 IPR036869 -
Rops3g02207 229 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 63 226 IPR044634 GO:0006450|GO:0030544|GO:0043022|GO:0051083
Rops3g02207 229 ProSitePatterns Nt-dnaJ domain signature. 88 107 IPR018253 -
Rops3g02207 229 Gene3D DnaJ domain 49 143 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02207 Rops-Chr3 43558662 43559766 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02207 74 225 C2H2 Transcription Factor Family AT1G74250 26.702 1.86e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02207 K09522 - gmx:100806665 304.679