Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02206 ATGCATTCTGTCACAAGTGCCTCCTTTTGGCCATCCACTCTCACACTCTCCCCCTGCAAGAATTCATGTGGTGCTTACAAAGTTCAATCCATTGACTCCATGGTAATTTATGACCTTGCAGGTCACGCCTTCCATTCTGCTGCTCTTAAACTTCTTGGTGTCCAGGAAGATAATAGGGATGTTGACAATAAAAAATGGTTGATGATAAGGAACAGACTTATTTCCCATCATCCGATTCCTATAGCAAAGAAGAGCAAAAAGAAATCTGCTCGGAGACAAGCAACAAGATCACTATGCCTTATAGGGTCCGAGCAATCTAAGGCTGAAGCGAGCAAAAAGGATGAAATAGAAAGTCACTTTAAGACAATTCAGGGAGTATATGAAGTGTTGATCGATCCTGTGAAGAGAAGAATTTATGATTCTATAGATGAGTTTGATGACGAGATTCCCACCGACTGTGCACCACAAGATTTCTTCAAGGTGTTTGGCCCTACTTTTATGAGGAATGGCCGGTGGTCAGTTAATCAACCAATTCCACCACTAGGGGATGATAATACTCCATTAAAAGAAGTTGATAATTTCTACAATTTTTGGTATTCATTCAAAAGCTGGAGAGAGTTTCCCCATGCCGATGAGTTTGATCTTGAGCAAGCTGAATCTCGAGACCATAGGAGGTGGATGGAAAGGCAGAATGCAAAACTGACAGAGAAAGCCAGGAAAGAAGAGTATGCACGGATACGCAATCTTGTTGATAATGCTTATAAGAGAGACCCAAGTCACTGTTGA 786 0.416 MHSVTSASFWPSTLTLSPCKNSCGAYKVQSIDSMVIYDLAGHAFHSAALKLLGVQEDNRDVDNKKWLMIRNRLISHHPIPIAKKSKKKSARRQATRSLCLIGSEQSKAEASKKDEIESHFKTIQGVYEVLIDPVKRRIYDSIDEFDDEIPTDCAPQDFFKVFGPTFMRNGRWSVNQPIPPLGDDNTPLKEVDNFYNFWYSFKSWREFPHADEFDLEQAESRDHRRWMERQNAKLTEKARKEEYARIRNLVDNAYKRDPSHC* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02206 261 ProSitePatterns Nt-dnaJ domain signature. 120 139 IPR018253 -
Rops3g02206 261 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 70 258 IPR044634 GO:0006450|GO:0030544|GO:0043022|GO:0051083
Rops3g02206 261 SUPERFAMILY Chaperone J-domain 114 167 IPR036869 -
Rops3g02206 261 Gene3D DnaJ domain 48 146 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02206 Rops-Chr3 43539436 43540325 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02206 107 257 C2H2 Transcription Factor Family AT1G74250 27.368 1.67e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02206 K09522 - gmx:100806665 330.487