Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02187 ATGGTTTGCTGTAAACCAGAGAAACTGGTTGTGTTTGTCTACTTGTGGTTGTGGTGGAGTACTAGTATTCATGTTAAATCAGAAGATGACAGTTTGAAGCCAGGTACTGAAGCAGATGAGGAAATTTTGTGGTTGAGTGATAGAAATCAACCCGTTGACCAGAATTCTTCATTGCTAACGCTAAACTACTCTGGTGTGCTGAAAATAGAATCTCAACATGGGAAACCAATAATCCTTTACTCTCCACCTAATGTCAGTGTCATCAACAACAACATTGTGGCCACCTTGTTGGACTCTGGCAATTTTGTGCTTCAACAACTTCACCCCAATGGGACAAAGAGTGTTGTGTTGTGGCAGAGTTTTGATTATCCCGTAGACACTTTGGAAGTTACGATGAAGTTAGGTGTCAACCACAAAACAGGACATAATTGGTCACTGGTTTCATACTTGACTGATTCACTCTCAACTCCTGGTGCTTTTAGCCTTGAATGGGAACCAAAAACACGCGAATTGATCATCAAACGACGAGGAAAAGTGTGCTGGACAAGTGGAAAACTTAGAAACAATAGATTCGAGCACATTCCAGAGAAAATTCAGCATATGTATCAGTACATCATTGTTTCTAACAGTGATGAAGACTCCTTCAGTTTCAATATCACAACTCAGAACAAAAACAAGTTTTCAGGATGGTCTTTAAAAGAAACAGGGCAGTTAACCAGTGCTCTAGGAGACATTGCAAGGGCTGATATGTGTTATGGATATAATAAGACTGAAGGGGGATGCCAAAAATGGGAGGATATACCCACTTGTAGGGAACCTGGTTATGTGTTTCAGAAAAAAACAGGTAGGCCCAATTATGAAAATGCAACCATTGAACCGAATACAGGTTATGGAAACAGTGATTGCATGGCCATTTGCTGGAGGAACTGTGACTGCACTGGATTCAAAGAGCATTATCGTAATGGAACTGGATGTACATTCTTTCAATGTCCACCGGAAGATTATTCTTTTAACAATAATGGAGAAAACTTTTACATGTTGATAAAGATAACCCCTCATAATGGTACAAAAAAGTGGATATGGATTAGTGCAGTAATAGCAGCTGCTCTATTCATAATATGCACATTCATTTTATGCCTAGCCTTAAAGAAACGAAAATATTGGCTTAAAGGGAAGAAAAGTAAAAGCATGGAGATGGAGCTGCAAGATTTGGATGCTACCGATGGATCTTATGGGATCAAAGATTTTGAAGATGATTTAAAGAAGGGTCATGATATCGAAGTATTTAACTATACATCAGTTTTGACGGCGACTAGTGACTTTTCACCTGAAAACAAGCTAGGACAGGGAGGCTTTGGACCTGTTTATAAGGGAGTCCTGCCAACAGGGCAAGAAGTTGCTGTGAAAAGACTCTCAAAAAATTCTGGGCAAGGAATTGTGGAATTTAAAAATGAGCTAACACTCATATGTGAACTTCAGCACACGAATCTTGTACAACTACTTGGTTGTTGCCTTCATAAAGAAGAGAGGATTCTAATTTACGAATATATGCCAAACAAAAGCTTAGATTTCTATCTATTCGATTGTACCAGAAGCAAGTCCCTAGATTGGAAGAAACGCTTCAACATAATTGAAGGAATTTCTCAAGGATTACTCTATCTTCATAAGTACTCAAGACTCAAAATCATTCATAGAGACTTGAAGGCTAGCAACATACTTCTTGATGAGAATATGAACCCAAAAATTTCTGATTTTGGTATGGCAAGAATATTTACACTTGAATCCACAATAAATACCAACAGGATTGTTGGGACATATGGTTACATGTCTCCAGAGTATGCCATGCAAGGAATCTGTTCCACAAAGTCTGATGTCTATAGCTTTGGAGTGTTGCTGCTTGAAATTGTTAGTGGAAGAAGAAATAATAGCTTCCATGATGCTGATGGCCCACTAAACCTAATAGGTCATGTATGGGAGCTTTGGAATGAGGGTGTGTGGCTACAGTTAATAGATCCATCATTAAATGAAACAGTTGTTCCTGATGAAGTGCAAAGATGCATTCATGTTGGTCTCTTATGCGTGCAACAAGATGCAAATGATCGACCTACAATGTCTGAGGTTCGGTGTCTTCCTGCCATAGAAGGTGAGCTGGAGGAAATTAAGGCTAAAAAAGAAAAGCTCGAGGATAAAAAGAAGATTTTGGACAACAAGTTGAAATCTTTTGATCAAATAATCAAGCAGCTGCGCGAGCAGATCCTAAAGGTTGAAGAAGAAAAGAATGAAAAAAAAGAGGTCCTTACTGAACTTGAGGGTGAGAAAGCTGCTAAGTTGGAAGTTGAGGCTCAAGCTCAATATTGGATGGGTGATGTGAAGAAAGCCAACACTGATGGCTTCAACAATGCTCTAAGGCAGGCCGAGTTTTTCAACAACCAGCTGCCAATCAATCATGAGCACTGTCGCCCTTGGCGCTTTATTGATGACAAGGGGCCTTTGAATGAATATCGCAAGGGCATTGTCCAAGTCATCGAGTAG 2532 0.3953 MVCCKPEKLVVFVYLWLWWSTSIHVKSEDDSLKPGTEADEEILWLSDRNQPVDQNSSLLTLNYSGVLKIESQHGKPIILYSPPNVSVINNNIVATLLDSGNFVLQQLHPNGTKSVVLWQSFDYPVDTLEVTMKLGVNHKTGHNWSLVSYLTDSLSTPGAFSLEWEPKTRELIIKRRGKVCWTSGKLRNNRFEHIPEKIQHMYQYIIVSNSDEDSFSFNITTQNKNKFSGWSLKETGQLTSALGDIARADMCYGYNKTEGGCQKWEDIPTCREPGYVFQKKTGRPNYENATIEPNTGYGNSDCMAICWRNCDCTGFKEHYRNGTGCTFFQCPPEDYSFNNNGENFYMLIKITPHNGTKKWIWISAVIAAALFIICTFILCLALKKRKYWLKGKKSKSMEMELQDLDATDGSYGIKDFEDDLKKGHDIEVFNYTSVLTATSDFSPENKLGQGGFGPVYKGVLPTGQEVAVKRLSKNSGQGIVEFKNELTLICELQHTNLVQLLGCCLHKEERILIYEYMPNKSLDFYLFDCTRSKSLDWKKRFNIIEGISQGLLYLHKYSRLKIIHRDLKASNILLDENMNPKISDFGMARIFTLESTINTNRIVGTYGYMSPEYAMQGICSTKSDVYSFGVLLLEIVSGRRNNSFHDADGPLNLIGHVWELWNEGVWLQLIDPSLNETVVPDEVQRCIHVGLLCVQQDANDRPTMSEVRCLPAIEGELEEIKAKKEKLEDKKKILDNKLKSFDQIIKQLREQILKVEEEKNEKKEVLTELEGEKAAKLEVEAQAQYWMGDVKKANTDGFNNALRQAEFFNNQLPINHEHCRPWRFIDDKGPLNEYRKGIVQVIE* 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02187 843 ProSitePatterns Serine/Threonine protein kinases active-site signature. 562 574 IPR008271 GO:0004672|GO:0006468
Rops3g02187 843 Gene3D Transferase(Phosphotransferase) domain 1 517 764 - -
Rops3g02187 843 Pfam Protein tyrosine and serine/threonine kinase 444 707 IPR001245 GO:0004672|GO:0006468
Rops3g02187 843 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 105 709 - -
Rops3g02187 843 CDD STKc_IRAK 447 707 - -
Rops3g02187 843 Coils Coil 710 775 - -
Rops3g02187 843 Gene3D Phosphorylase Kinase; domain 1 413 516 - -
Rops3g02187 843 SUPERFAMILY Protein kinase-like (PK-like) 426 717 IPR011009 -
Rops3g02187 843 SMART serkin_6 441 713 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g02187 843 Pfam D-mannose binding lectin 42 148 IPR001480 -
Rops3g02187 843 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 407 516 - -
Rops3g02187 843 ProSiteProfiles Bulb-type lectin domain profile. 1 117 IPR001480 -
Rops3g02187 843 SUPERFAMILY alpha-D-mannose-specific plant lectins 42 149 IPR036426 -
Rops3g02187 843 PIRSF SRK 245 760 IPR024171 GO:0004674
Rops3g02187 843 PIRSF SRK 30 248 IPR024171 GO:0004674
Rops3g02187 843 ProSiteProfiles Protein kinase domain profile. 441 713 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g02187 843 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 517 719 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02187 Rops-Chr3 42659460 42686491 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02187 418 707 Receptor kinase-like Gene Family AT4G23140 59.596 3.99e-114 361
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops3g02187 PK_Tyr_Ser-Thr 3.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02187 - - vun:114168194 929.087