Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02186 ATGGCGCAAATTCTGCTTCATGGGATTCTGCATGCCACCATCTGTGAGGTCGATAAGCTCAAAACTGGTGGTGGAGGCAACATTTTTAGTAAGATCAAGCAAAACTTTGAGGAAACTGTTGGTATTGGAAAAGGAGTTACCAAACTCTATGCTACCATTGGTCTGGAGAAGGCAAGAGTGGGAAGGACTAGGATTATAGAAAATGAACATGCTAATCCCAAATGGTGTGAGTCTTTTCACATTTATTGTGCTCATATGGCTTCAAATATTATATTCGCTGTGAAGGATGCTTATCCTATTGGAGCAACTTTAATTGGAAGAACATATGTGCCTGTTGAGGAGGTCTTGGATGGTGAGGAAATAGATAGATAG 372 0.4059 MAQILLHGILHATICEVDKLKTGGGGNIFSKIKQNFEETVGIGKGVTKLYATIGLEKARVGRTRIIENEHANPKWCESFHIYCAHMASNIIFAVKDAYPIGATLIGRTYVPVEEVLDGEEIDR* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02186 123 Gene3D C2 domain 4 123 IPR035892 -
Rops3g02186 123 Pfam C2 domain 9 122 IPR000008 -
Rops3g02186 123 PANTHER PHOSPHOLIPASE D 4 122 IPR015679 -
Rops3g02186 123 SMART C2_3c 9 123 IPR000008 -
Rops3g02186 123 ProSiteProfiles C2 domain profile. 1 123 IPR000008 -
Rops3g02186 123 CDD C2_plant_PLD 2 123 - -
Rops3g02186 123 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 120 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02186 Rops-Chr3 42648980 42649351 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02186 1 123 Phospholipase D Gene Family (Wang group) AT3G15730 68.548 4.16e-51 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02186 K01115 - lja:Lj0g3v0244679.1 216.083