Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02183 ATGATATCCAACATGGTTTGGTGTAAAGTAGAGAAACTGGTTGTGTTCATATACTTGTGGTTGTGGTGGAGTAGTACCAGTATTCATGTTAAAGCAGAAGATGACAGTTTGAGGCCAGGTGATACCCTGAATCACACATCCAAGCTATGTTCTAAAAATGGAAAATATTGTATGGAATTTGGCCGAACATCCGGTGATGAGGACGATTACTTGCTTATTGAAGATACATATGGGGATACAGTGTGGTTTAGTGATAGAAATCAACCAGTTGACCTTGATTCGGCAGTTCTATCGCTAAACCACGATGGTGTTCTGCAAATAGGACTTAAACGTGGGAAACCAATCATCCTTTACGCTCCACCTAAATTCAGAGCCACCAACAACACTGTGGCCACCTTGTTGGACTCTGGCAACTTTGTGCTTCAACAACTTCTCCCCAATGGGACAAAGAGTGTTGTGTTGTGGCAGAGTTTTGATTATCCCACAGACACTTTACTCCCTACAATGAAGTTAGGTGTCAACCACAAAACAGGACATAATTGGTCACTGGTTTCGTCCTTGACTGATTCACTCTCAACTCCTGGTGCCTTTAGCCTTGAATGGGAACCAAAATCACGCGAATTGATCATCAAGCGACGTGGAAAAGTGTGCTGGAGAAGTGGGAAACTTATAAACAATAGATTCGAACACATTCCAGAGGAAATCCAGCGTATGTATCAGTACACCATTGTCTCTAACAGGGATGAGGACTCGTTCGGTTTCGAAATCAAAACTCCAATTAAAGGAATGTTTCCAGGATGGCAGCTATCAGACACAGGGCAATTAACAAGTGAAGAAGGAGATATTGCGAGGGCTGATAAGTGTTATGGATATAATAATACTGAAGGGGGATGCCAAAGATGGGAGGATATACCCACATGTAGGGAACCTGGTGATGTGTTTCAAAGAAAGATAGGTCGTGCCAGTTGTAACGGTACAATCTATAAAATAAATAATACAGGCTATGGCGACAGTGATTGCAAGGCCATGTGCTGGAGCAACTGTAGCTGCACCGGATACATGAACTATCATGCTGATGGAGCTGGATGCGTTCTATATGACTGTCCAGTAGAAGATAATATTTCTGACAATAGTGAAGATGACCTCTACATGCTGGTAAGGATAGACACACATAAAGGTACCACTGGAATAAGAGAGATAAACCCACATAAAGGTACAAAAAGAAGGTGGATATGGATAACTGCAGTAACAGACGCTGCACTACTGATAACATGCGCATTTATTTTATGCCTAGCCTTACGAAAACGAAAATATTGGCTTAAAGGGAAGAGCAAAAAAATGGAGATAGAGATGCCAGATTTGACAGCTTCCGAGGGATCTTCTGATATCAAACATCTTGAAGATGATTTAAAGAACGGCCATGATGTCAAAGTATTTAACTATACATCAGTTTTGACGGCGACAAATGACTTTTCACCTGAAAACAAGCTAGGACAGGGAGGCTTTGGACCTGTTTATAAGGGAATCCTACCAACAGGGCAAGAAGTTGCTGTGAAAAGACTCTCAAAAAATTCTGGGCAAGGAGTTGTGGAATTCAAAAATGAACTAACACTTATATGTGAACTTCAGCACATGAATCTTGTACAACTACTTGGTTGTTGCATTCATAAAGAAGAGAGGATTCTAATTTATGAATACATGCCAAACAAAAGCTTGGATTTCTATCTGTTCGATTGTACAAAAAGCAAGTTCCTAGATTGGAAGAAGCGGTTCAACATAATAGAAGGAATTTCTCAAGGATTACTCTATCTTCATAAGTACTCAAGACTCAAAATCATTCACAGAGACTTGAAGGCAAGCAACATACTTCTTGATGAGAATATGAACCCAAAAATTTCAGATTTTGGTATGGCAAGAATATTTACACTTGAATCCACTATAAATACCAACAGGATTGTTGGGACATATGGTTACATGTCTCCAGAGTATGCCATGCAAGGAATCTGTTCCACAAAGTCTGATGTCTATAGCTTTGGAGTGTTACTGCTTGAAATTATTAGTGGAAGAAGAAACAATAGCTTCTATGATGCTGATGGTCCACTAAACCTAATAGGTCATGTATGGGAGCTATGGAATGAGGGTGTGTGGCTACAGTTAATAGATCCATCATTAAATGACACAGTTGTTCCTGATGAAGTGAAAAGATGCATTCATGTTGGTCTCTTATGTGTGCAACAAGATGCAAATGATAGACCTACAATGTCTGAAGTTATTTCAATGTTAACAAAAAAAATTACAGTTGATACGTTGCCAAGAAGACCAGCATTCTATGTTGGAAGATAG 2343 0.3978 MISNMVWCKVEKLVVFIYLWLWWSSTSIHVKAEDDSLRPGDTLNHTSKLCSKNGKYCMEFGRTSGDEDDYLLIEDTYGDTVWFSDRNQPVDLDSAVLSLNHDGVLQIGLKRGKPIILYAPPKFRATNNTVATLLDSGNFVLQQLLPNGTKSVVLWQSFDYPTDTLLPTMKLGVNHKTGHNWSLVSSLTDSLSTPGAFSLEWEPKSRELIIKRRGKVCWRSGKLINNRFEHIPEEIQRMYQYTIVSNRDEDSFGFEIKTPIKGMFPGWQLSDTGQLTSEEGDIARADKCYGYNNTEGGCQRWEDIPTCREPGDVFQRKIGRASCNGTIYKINNTGYGDSDCKAMCWSNCSCTGYMNYHADGAGCVLYDCPVEDNISDNSEDDLYMLVRIDTHKGTTGIREINPHKGTKRRWIWITAVTDAALLITCAFILCLALRKRKYWLKGKSKKMEIEMPDLTASEGSSDIKHLEDDLKNGHDVKVFNYTSVLTATNDFSPENKLGQGGFGPVYKGILPTGQEVAVKRLSKNSGQGVVEFKNELTLICELQHMNLVQLLGCCIHKEERILIYEYMPNKSLDFYLFDCTKSKFLDWKKRFNIIEGISQGLLYLHKYSRLKIIHRDLKASNILLDENMNPKISDFGMARIFTLESTINTNRIVGTYGYMSPEYAMQGICSTKSDVYSFGVLLLEIISGRRNNSFYDADGPLNLIGHVWELWNEGVWLQLIDPSLNDTVVPDEVKRCIHVGLLCVQQDANDRPTMSEVISMLTKKITVDTLPRRPAFYVGR* 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02183 780 ProSiteProfiles Protein kinase domain profile. 491 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g02183 780 Pfam Protein tyrosine and serine/threonine kinase 494 761 IPR001245 GO:0004672|GO:0006468
Rops3g02183 780 ProSiteProfiles Bulb-type lectin domain profile. 34 154 IPR001480 -
Rops3g02183 780 SUPERFAMILY Protein kinase-like (PK-like) 476 774 IPR011009 -
Rops3g02183 780 SMART serkin_6 491 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g02183 780 ProSiteProfiles PAN/Apple domain profile. 307 387 IPR003609 -
Rops3g02183 780 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 140 777 - -
Rops3g02183 780 CDD STKc_IRAK 497 763 - -
Rops3g02183 780 Pfam D-mannose binding lectin 80 185 IPR001480 -
Rops3g02183 780 Gene3D - 28 158 IPR036426 -
Rops3g02183 780 SMART blect_4 34 161 IPR001480 -
Rops3g02183 780 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 456 566 - -
Rops3g02183 780 ProSitePatterns Serine/Threonine protein kinases active-site signature. 612 624 IPR008271 GO:0004672|GO:0006468
Rops3g02183 780 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 567 769 - -
Rops3g02183 780 Pfam PAN-like domain 326 365 IPR003609 -
Rops3g02183 780 Gene3D Phosphorylase Kinase; domain 1 456 566 - -
Rops3g02183 780 Gene3D Transferase(Phosphotransferase) domain 1 567 770 - -
Rops3g02183 780 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 189 IPR036426 -
Rops3g02183 780 PIRSF SRK 278 780 IPR024171 GO:0004674
Rops3g02183 780 PIRSF SRK 7 277 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02183 Rops-Chr3 42544006 42548907 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02183 419 777 Receptor kinase-like Gene Family AT3G45860 52.762 1.69e-123 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops3g02183 PK_Tyr_Ser-Thr 2.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02183 - - mtr:11409308 993.801