Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02181 ATGTTTCATGATGACATACAGGTGGCTGAACTGTTTGAAAGCAGGGAACTTGTTGGAGTAGTTCGAGGATGCATTAAGAGTGTGCGTACTCCTTCTGGATCACTCTTGAAAATGGGTTGCATATTAGGCCTCAGAGTCTCTCCTACCCACAGGAGAAAAGGGGTTGGACTAAAACTTGTGACCTCAATTGAAGAATGGATGTTGAGAAATGGGGCTGAGTACTGGTTCCTAGCCACTGAAAACAACAACGATGCCTCTAAAAACCTATTTACCAACAAATGCAACTATGTGAAGCTTAGCTCACTTGCCATATTTTTCCATCCAACTAGTTTCCCTGCAAAGCAGATTTCCAAGGAGATAAAATAG 366 0.4235 MFHDDIQVAELFESRELVGVVRGCIKSVRTPSGSLLKMGCILGLRVSPTHRRKGVGLKLVTSIEEWMLRNGAEYWFLATENNNDASKNLFTNKCNYVKLSSLAIFFHPTSFPAKQISKEIK* 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02181 121 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 7 120 - -
Rops3g02181 121 Pfam Acetyltransferase (GNAT) family 12 96 IPR000182 GO:0016747
Rops3g02181 121 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 1 121 IPR000182 GO:0016747
Rops3g02181 121 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 9 91 IPR016181 -
Rops3g02181 121 CDD NAT_SF 11 77 - -
Rops3g02181 121 Gene3D - 3 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02181 Rops-Chr3 42520809 42521275 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Rops3g02181 Acetyltransf_1 2.2e-14 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02181 - - vum:124845889 196.823