Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02175 ATGGAGATGGGGGCAGTTTCCATGGGATCTTCTAGTATCAACGATCCTGAAGATGATTTAAATAAGGGAAAAGACATAAAAGTATTTAACTATACATCAGTTTTGACAGCCATGAGTGACTTTTCAGCTGAAAACAAACTGGGGCAGGGAGGCTTTGGACCTGTTTATAAGGGAATACTGCCAACAGGGCAACGTAGCTGTGAAAAGACTCAAAATTCTGGGCAAGGAGTTGTGGAATTTAAAAATGAACTAACACTAGTACGTGAACTTCAACATACAAATCTTGTACAACTACTTGCTTGTTGCATTCATGAAGAAGAAAAGATTCTAATTTACGAATATATGCCAAACAAAAGCTTGGATTTCTATCTATTCGATGAGGATTATGTTGGAGTCATTTAA 402 0.3706 MEMGAVSMGSSSINDPEDDLNKGKDIKVFNYTSVLTAMSDFSAENKLGQGGFGPVYKGILPTGQRSCEKTQNSGQGVVEFKNELTLVRELQHTNLVQLLACCIHEEEKILIYEYMPNKSLDFYLFDEDYVGVI* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02175 133 Pfam Protein tyrosine and serine/threonine kinase 43 126 IPR001245 GO:0004672|GO:0006468
Rops3g02175 133 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 19 125 - -
Rops3g02175 133 Gene3D Phosphorylase Kinase; domain 1 7 114 - -
Rops3g02175 133 ProSiteProfiles Protein kinase domain profile. 41 133 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g02175 133 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 16 114 - -
Rops3g02175 133 SUPERFAMILY Protein kinase-like (PK-like) 21 126 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02175 Rops-Chr3 42383957 42384435 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02175 13 133 Receptor kinase-like Gene Family AT4G04500 52.033 2.74e-34 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops3g02175 PK_Tyr_Ser-Thr 7.7e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02175 - - gmx:100809767 176.022