Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02171 ATGAAGAAGATCAATCTATTACTCAGAAAGTGCAAGAGCTTGTCAAGGCAACTAGGAAGATCTTCATCATATAGTAGCTTGAGGTCCAAATCTGCTAAGGAAGAATTTTGGGCAGGGAATGTCATGCAAGAAGATGAACATTGTGAAACTATATATGTTGGAAGCACAAGGAAACGGTATGTGATAAGCTCCAAGTATGTGAATCATCCTCTTCTAAATGCTCTAATCAACAAGTCAAAGCAAAAGGGTAGTGATGAAAATGTTTTGGTGGTAAACTGTGAAGTTGTTCTCTTTGATCATCTATTGTGGATGATTGAAAATGCAGATCCTAAGTTTAGTTCTGACTCTTTGGAGGAATTGGCTGAACTCTATGTGTTTTAA 381 0.3701 MKKINLLLRKCKSLSRQLGRSSSYSSLRSKSAKEEFWAGNVMQEDEHCETIYVGSTRKRYVISSKYVNHPLLNALINKSKQKGSDENVLVVNCEVVLFDHLLWMIENADPKFSSDSLEELAELYVF* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02171 126 PANTHER EXPRESSED PROTEIN 6 125 - -
Rops3g02171 126 Pfam Auxin responsive protein 11 105 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02171 Rops-Chr3 42281465 42282131 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02171 50 107 Calmodulin-binding Proteins AT5G20810 35.000 1.02e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02171 - - gmx:100527910 192.971