Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02131 ATGCAATTATGAGTGATTGCTGTCAAGCAACTGTCTACCCAATCTCGTCAAGGAAACTCAGAGTTCATAACTGAAAGGGATAAACAGCTTCTTGTTTATGAGTATTTAGAAAATGGGAGTCTTAATCAACTACTATTTGGAAAAGATAGTTCAATCCTCAATTGGCCGATGCGACATCATATCTGCTTGGGCATTGCACGAGGCCTAGCCTATCTCCATGAAGAGTCACAGCTTCGTATAATTCACCGTGATGTGAAGGCTAGCAATATTCTGCTTGACCATCAATTCATCCCTAAATTATCAGATTTTGGTTTGGCTAAGTTGTTTGATGAGGAAAAAACCCACTTAAGTACTCGTCTTGCTGGGACAATGGGATATTTGGCACCGGAGTATGCCTGGCGTGGGCACCTCACAGAGAAAGCAGATGTGTTTTCCTTTGGTATTGTGGCTCTAGAGATTGTTAGTGGAAGACAGAATTCTGATTCTAGCTTTGACGTTGAAGGAAATGAGACATTCCTTCTAGAATGGGCTTGGAATCTATCTATAAACAACAATGAAATTGAGTTGGTGGATTCCAGACTGTCAGAATTTGATGAGATGGAAGTGAAACGAGTTGCTGGCATTTCACTATTGTGCACACAAGCTTCACCTGCCTTACGTCCATCCATGTCCCGCGTAGTGGCAATGCTTTCTGGAGATGTTGAAGTGACCCGTGTAAATTCAATGCCTGCATACTTGGCTTATATGAACTTTGATGATGTAACAGAAATGATGAATACAAATGATGGAATAGATATGAGTGATCATCACACAACAGCAAACACCAGCATTAGGGGTGAGGTCAGCGAATACCCATTAATGATCTGCCACAACAGCGCTTCATCAGAATGTTAA 894 0.415 MQL*VIAVKQLSTQSRQGNSEFITERDKQLLVYEYLENGSLNQLLFGKDSSILNWPMRHHICLGIARGLAYLHEESQLRIIHRDVKASNILLDHQFIPKLSDFGLAKLFDEEKTHLSTRLAGTMGYLAPEYAWRGHLTEKADVFSFGIVALEIVSGRQNSDSSFDVEGNETFLLEWAWNLSINNNEIELVDSRLSEFDEMEVKRVAGISLLCTQASPALRPSMSRVVAMLSGDVEVTRVNSMPAYLAYMNFDDVTEMMNTNDGIDMSDHHTTANTSIRGEVSEYPLMICHNSASSEC* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02131 296 ProSitePatterns Serine/Threonine protein kinases active-site signature. 79 91 IPR008271 GO:0004672|GO:0006468
Rops3g02131 296 SUPERFAMILY Protein kinase-like (PK-like) 5 255 IPR011009 -
Rops3g02131 296 FunFam Putative LRR receptor-like serine/threonine-protein kinase 35 241 - -
Rops3g02131 296 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 24 259 - -
Rops3g02131 296 ProSiteProfiles Protein kinase domain profile. 1 244 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g02131 296 SMART serkin_6 2 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g02131 296 Gene3D Transferase(Phosphotransferase) domain 1 35 242 - -
Rops3g02131 296 Pfam Protein tyrosine and serine/threonine kinase 21 228 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02131 Rops-Chr3 40610097 40614975 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02131 5 285 Receptor kinase-like Gene Family AT1G56120 56.291 1.56e-108 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops3g02131 PK_Tyr_Ser-Thr 4.6e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02131 - - twl:119985727 356.681