Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02128 ATGGGGACACTTGATGATGGAAGAGTGATTGCTGTCAAGCAACTGTCTACCCGATCTCGTCAAGGAAACTCAGAGTTCATAACTGAAATTGCTACTATATTGGCAGTGCAACATCAAAATGGGAGTCTTAATCAACTACTATTTGGAAAAGATAGTTCAATCCTCAGTTGGCCGATGCGATATCATATCTGCTTGGGCATTGCACGAGGCCTAGCCTATCTCCATGAAGAGTCACAGCTTCGTATAATTCACCGTGATGTGAAGGCTAGTAATATTCTGCTTGACCATCAATTCACCCCTAAAATATCAGATTTTGGTTTGGCTAAGTTGTTTGATGAGGAAAAAACCCACTTAAGTACTCGTCTTGCTGGGACAATGGGATATTTGGCACCAGAGTATGCCTGGCGTGGGCACCTCACAGAGAAAGCAGATGTGTTTTCCTTTGGTATTGTGGCTCTAGAGATTGTTAGTGGAAGACAGAATTCTGATTCTAGCTTTGCAATCGAAGGAAATGAGACGTTCCTTCTAGAATGGGTATGA 540 0.4259 MGTLDDGRVIAVKQLSTRSRQGNSEFITEIATILAVQHQNGSLNQLLFGKDSSILSWPMRYHICLGIARGLAYLHEESQLRIIHRDVKASNILLDHQFTPKISDFGLAKLFDEEKTHLSTRLAGTMGYLAPEYAWRGHLTEKADVFSFGIVALEIVSGRQNSDSSFAIEGNETFLLEWV* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02128 179 ProSiteProfiles Protein kinase domain profile. 1 179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g02128 179 FunFam probable LRR receptor-like serine/threonine-protein kinase RKF3 38 179 - -
Rops3g02128 179 ProSitePatterns Serine/Threonine protein kinases active-site signature. 82 94 IPR008271 GO:0004672|GO:0006468
Rops3g02128 179 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 2 40 - -
Rops3g02128 179 Gene3D Transferase(Phosphotransferase) domain 1 43 179 - -
Rops3g02128 179 Pfam Protein kinase domain 40 160 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g02128 179 SUPERFAMILY Protein kinase-like (PK-like) 4 163 IPR011009 -
Rops3g02128 179 SMART serkin_6 4 179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g02128 179 Gene3D Phosphorylase Kinase; domain 1 1 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02128 Rops-Chr3 40499219 40500148 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02128 2 178 Receptor kinase-like Gene Family AT1G56120 58.500 4.95e-74 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops3g02128 Pkinase 1.1e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02128 - - han:110913429 253.062