Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02124 ATGACTGAGATTGCTACTATATCGGCAGTGCAGCATCGTAACCTCATTAAATTACACGGATGCTGCATCGAAAAGGATAAACAGCTTCTTGTATATGAGTATTTAGAAAATGGGAGTCTCAATCAACTACTATTTGGAAATGGTAATTCAATCCTCAATTGGCCGATGCGATATAGTATCTGCTCAGGCATTGCACGAGGCCTGGCCTATCTCCATGAAGAGTCACGGCTTCGTATAATTCACCGTGACGTGAAGGCTAGTAACATTCTGCTTGACCATCAATTTATCCCTAAAATATCAGATTTTGGTTTGGCTAAGTTGTTTGATGAGGAGAAAACCCACTTAAGTACTCGTCTTGTTGGGACAATGGGATATTTGGCACCAGAGTATGCCTGGCGTGGGCACCTCACAGAGAAAGCAGATGTGTTTTCCTTTGGTATTGTGGCTCTAGAGATTGTTAGTGGAAGGCAGAATTCTGTTTCTAGCTTTGACATTGAAGGAAATGAGACGGGCCTTCTAGAAAGGGCTTGGAACCTGCATATAAACAACAATGAAATTGAGTTGGTGGATTCTAAACTGTCAGAATTTGATGAGATGGAAGTGAAACAAGTTGTTGGCATTTCATTATTGTGCACACAAGCTTCACCTGCCTTACGTCCATCCATGTCCCGCGTAGTGGCAATGCTTTCTGGAGATGTTGAAGTGACCCGTGTAAATTCAATGCCTGCGTACTTGGCTTATATGAAATTTGATGATGTAGCAGATTTGATGAATACAAATAATGGAATAGATATGAGTTATCATCACACATCAGCAAACACCAGCATTAGGGGTGATATCAACTAA 846 0.4125 MTEIATISAVQHRNLIKLHGCCIEKDKQLLVYEYLENGSLNQLLFGNGNSILNWPMRYSICSGIARGLAYLHEESRLRIIHRDVKASNILLDHQFIPKISDFGLAKLFDEEKTHLSTRLVGTMGYLAPEYAWRGHLTEKADVFSFGIVALEIVSGRQNSVSSFDIEGNETGLLERAWNLHINNNEIELVDSKLSEFDEMEVKQVVGISLLCTQASPALRPSMSRVVAMLSGDVEVTRVNSMPAYLAYMKFDDVADLMNTNNGIDMSYHHTSANTSIRGDIN* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02124 281 FunFam Putative LRR receptor-like serine/threonine-protein kinase 35 241 - -
Rops3g02124 281 Gene3D Phosphorylase Kinase; domain 1 1 35 - -
Rops3g02124 281 SMART serkin_6 1 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g02124 281 ProSiteProfiles Protein kinase domain profile. 1 244 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g02124 281 Pfam Protein tyrosine and serine/threonine kinase 1 229 IPR001245 GO:0004672|GO:0006468
Rops3g02124 281 ProSitePatterns Serine/Threonine protein kinases active-site signature. 79 91 IPR008271 GO:0004672|GO:0006468
Rops3g02124 281 Gene3D Transferase(Phosphotransferase) domain 1 36 242 - -
Rops3g02124 281 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 1 253 - -
Rops3g02124 281 SUPERFAMILY Protein kinase-like (PK-like) 2 261 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02124 Rops-Chr3 40426400 40428528 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02124 1 253 Receptor kinase-like Gene Family AT1G56120 63.636 2.33e-111 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Rops3g02124 PK_Tyr_Ser-Thr 7.7e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02124 - - twl:119985727 380.948