Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02120 ATGATTCAAGGGAGAAATATATCCAACCATTTAAGTCTTTCCTCTGTTGCAATGGTACTAAATTTGGTTGAAGAGGATCAAAGCAAATGGAGTGTTCTAAAAGACAGTAGAGTGGGAGATAGCAAAAACTGTGGTGCTACATGGGCATTTGAAGTGGAACACCAGACAATGGTATGCCCAATTATAGTTGAGGACATGAGCACACCTGGCCAAATGCTTATAGAGATGCTTTGTGATGAGCAGGGTTTCTTCCTTGAGATAGTTGACATAATTCGGGGTTTGGGGCTGAATATCTTGAAAGCAAAGATGGAACTAAGGAAGAACAAACTATGGTCAGAACTATGTAATCCTAAGGCACCTGCATCACCACTTAGTTATGTCGAGACTGAGCACATCTGTGGAAGGCCTTTGGGACTCAGATTTGACAAGAAAACTGGTGATTTATACATTGCAGATGCGTATTTTGGGCTGATGAAGGTGGGTCCTCAGGGTGGTTTAGCAACATCTCTTGCAACAGAGGCTGAAGGGGTGCCACTGAGATTTACTAATGATGTAGACATTGATACAGAGGGGTGCCACTGA 582 0.4278 MIQGRNISNHLSLSSVAMVLNLVEEDQSKWSVLKDSRVGDSKNCGATWAFEVEHQTMVCPIIVEDMSTPGQMLIEMLCDEQGFFLEIVDIIRGLGLNILKAKMELRKNKLWSELCNPKAPASPLSYVETEHICGRPLGLRFDKKTGDLYIADAYFGLMKVGPQGGLATSLATEAEGVPLRFTNDVDIDTEGCH* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02120 193 SUPERFAMILY Calcium-dependent phosphotriesterase 127 191 - -
Rops3g02120 193 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 31 112 IPR043561 GO:0003700|GO:0006355
Rops3g02120 193 Gene3D - 85 192 IPR011042 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02120 Rops-Chr3 40244916 40248656 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02120 18 114 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 45.361 6.75e-23 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02120 - - mtr:11418029 152.525