Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02117 ATGAAGCAATTGATCCGCAAGTTCTCCCGAGTCGCTGACTCGTCGCAGTACACTCTCCTCCGATCCGAGTCACGGAGAGCGCGTCGAACCTCTTTACGGCGGAAGCACGTGCCGGTGGGTCACGTGCCGGTTTATGTGGGTGAGGAGATGGAACGGTTCGTTGTGAGTGCTGAGTTAATGAACCACCCGGTTTTCGTGAAGCTTCTGAACCGGTCGGCTCAGGAATACGGTTATGAACAGAAGGGGGTGCTTCGAATCCCTTGTCACGTCGTCGTTTTTGAACGAGTTCTTGAAGCGCTTCGACTCGGTTGTGACTCGGGGGATATACACGAACTCGTTAGTTCCTCCGTTGAATAG 357 0.5378 MKQLIRKFSRVADSSQYTLLRSESRRARRTSLRRKHVPVGHVPVYVGEEMERFVVSAELMNHPVFVKLLNRSAQEYGYEQKGVLRIPCHVVVFERVLEALRLGCDSGDIHELVSSSVE* 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02117 118 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 26 96 IPR003676 GO:0009733
Rops3g02117 118 Pfam Auxin responsive protein 13 100 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02117 Rops-Chr3 40072401 40072757 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02117 37 106 Calmodulin-binding Proteins AT4G34750 45.714 6.45e-15 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02117 K14488 - cave:132175866 154.451