Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02094 ATGCCAGGGAACAAGTATAACGGCGACTCTGATCACATTCCACAGGGTCGTGTTGAACGACTCTTGAGAGAAAGAGAATTGAGAAAAAGTGCGAGGGTGATTCATTCGAATGAGTCCAATGATAATGGGAACAATTACAACAATAGGGTTGTTGAAGCTTTTGAGCAAGAGCTTCATTTGAGAGAAGATGATAAGAAAGGTGATGTTGAAGGGGGAACACAAGGGAGGAGGGTTGGTGAAGGGTGTGAGAGACAAGATGGGAAAGGTTATAGACAAAGGCTTTTGGTGGTTGCAAATAGGTTACCAGTGTCAGCAATTAGGAGAGGTGAGGATTCATGGTCTTTGGAGATAAGTGCTGGTGGCTTGGTCAGCGCTCTGTTAGGTGTGAAGGAGTTTGAGGCAAGGTGGATAGGTTGGGCTGGTGTGAATGTGCCAGATGAGATTGGACAGAAGGCACTTACTAATGCATTGGCTGAAAAGAGGTGTATCCCTGTATTTCTTGATGAAGAGATTGTTCACCAATATTATAATGGCTATTGCAACAACATCTTGTGGCCCCTTTTCCATTACATTGGACTTCCACAAGAAGACCGCCTTGCCACCACGCGTAGTTTCCAATCTCAGTTTGAAGCTTATGAGAGAGCAAATCAAATGTTTGCTGATGTTGTGAACAAGCACTATGAAGAGGGTGATGTTGTTTGGTGCCATGATTACCATCTTATGCACCTTCCAAAATGCTTAAAGAAACATAATAGTAAAATGAAAGTTGGATGGTTTCTCCACACCCCTTTCCCATCTTCTGAAATTCATAGGACACTGCCATCTCGTTCGGACCTCCTTCATTCTGTCCTTGCAGCTGATTTAGTTGGTTTTCACACCTATGATTATGCAAGACATTTTGTTAGTGCTTGTACTCGCATCCTTGGACTTGAGGGTACACCCTATGGGGTTGAGTATCAAGGGAAGCTGACTCGAGTTGCTGCGTTTCCAATTGGGATAGACTCAGAACGATTTATCCGTGCACTTGACCTTCCTCAAGTACAGGAACACATGAAAGAATTACAAGAAAGATTTAAAGGCAGAAAGGTAATGTTAGGTGTTGATCGCCTTGATATGATTAAAGGAATCCCTCAGAAAATTCTAGCATTTGAAAAATTTTTGGAAGAAAATGCTTATTGGCGTGATAAAGTCGTTTTGCTTCAAATTGCTGTGCCAACAAGAACAGATGTTCCTGAGTATCAAAAGCTTACAAGCCAGGTTCATGAAATTGTTGGTCGCATCAATGGTAGATTTGGAACATTGACTACTGTTCCTATACATCACCTGGATCGTTCTCTTGATTTTCATGCGCTATGTGCTTTGTATGCAGTTACTGATGTAGCACTAGTCACATCTTTGAGGGATGGAATGAATCTTGTCAGCTATGAATTTGTTGCCTGCCAGGAGAAAAAGAAAGGGGTTCTCATTCTTAGTGAATTTGCTGGTGCAGCACAGTCTCTTGGTGCTGGAGCAATTCTTGTCAACCCCTGGAACATTACAGATGTTGCTGCTGCAATTGCCAGGGCACTGAATATGACATCGGCAGAAAGAGAAAAGAGACATAAGTATAATTTTCATCATGTAAAATCTCACACTGCTCAAGAATGGGCAGGAACTTTTGTAAGTGAACTAAATGATACTGTTATTGAGGCGCAACTAAGGACAAGACAAGTTCCTCCCTGGCTACCATCCAAGACTGCAATTGAACAATATCTGCAATCAACTAATAGATTGCTCATTTTGGGATTCAATGGAACTTTAACTGAACCAGTGGAGAAAACAGGTGATCAGATCAAAGAAATGGAACTTAAGGTGCATCCAAAATTGAGACAACCCTTGACAGCACTTTGCAGTGATCCAAATACCACAGTAGTTGTACTCAGTGGAAGTGGTAGAAAAGTCCTCGATGATAACTTCAAAGAATATGACACGTGGTTGGCAGCAGAGAATGGGATGTTTTTACACCCTTCAAAGGGTGATTGGATGACCACAATGCCAGAGCATCTTAATATGGAATGGGTTGACAGCGTGAAGCATGTTTTTGAGTACTTCACAGAAAGAACACCTCGGTCACATTTTGATTTCGAAGAAAGGGAAACTTCACTTGTATGGAACTACAAATATGCAGATGTTGAGTTTGGAAAACTTCAAGCTAGGGACATGCTGCAGCATCTATGGACAGGTCCAATTTCTAATGCTTCAGTTGAAGTTGTTCAAGGGAGCCGATCCGTTGAGGCGCGAGCAGTTGGGGTTACAAAGGGAGCAGCTATTGACCGCATCCTGGGTGAGATAGTCCACAGTAAATCGATGACATCACCAATTGATTATGTTCTTTGTATAGGACATTTTCTGGGGAAGGATGAAGATATTTATGCCTTTTTTGAGCCGGATCTTCCTTCTATTGGTGTTGGCCTTCCACGAAGTAGGTTAACAACAGATGCAGTTAAGTTTCCTGCTGAGAGGAGACCATCATCTTTGAAGATCCCAGTTAGTAAAAATGGTCCAAAGTCATCATCTCAAAATAATAAGGCACAAAGGCCAGTGTCAAATTCTGAGAAGAAGACAAATAATCATATCTACAGTGCACCAAAACGCCCAGCTCCTGAAAAGATTTCATGGAATGTCCTTGACCTTAAGAAAGAGAATTACTTCTCATGTGCTGTTGGGAGAACAAGAACAAATGCTCGGTATACTCTTGGATCATCAGATGATGTTGTCTCGTTTCTGATGGAACTAGCAGATGCATCATTGCACTCTTAA 2799 0.4187 MPGNKYNGDSDHIPQGRVERLLRERELRKSARVIHSNESNDNGNNYNNRVVEAFEQELHLREDDKKGDVEGGTQGRRVGEGCERQDGKGYRQRLLVVANRLPVSAIRRGEDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQKALTNALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYIGLPQEDRLATTRSFQSQFEAYERANQMFADVVNKHYEEGDVVWCHDYHLMHLPKCLKKHNSKMKVGWFLHTPFPSSEIHRTLPSRSDLLHSVLAADLVGFHTYDYARHFVSACTRILGLEGTPYGVEYQGKLTRVAAFPIGIDSERFIRALDLPQVQEHMKELQERFKGRKVMLGVDRLDMIKGIPQKILAFEKFLEENAYWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTTVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQEKKKGVLILSEFAGAAQSLGAGAILVNPWNITDVAAAIARALNMTSAEREKRHKYNFHHVKSHTAQEWAGTFVSELNDTVIEAQLRTRQVPPWLPSKTAIEQYLQSTNRLLILGFNGTLTEPVEKTGDQIKEMELKVHPKLRQPLTALCSDPNTTVVVLSGSGRKVLDDNFKEYDTWLAAENGMFLHPSKGDWMTTMPEHLNMEWVDSVKHVFEYFTERTPRSHFDFEERETSLVWNYKYADVEFGKLQARDMLQHLWTGPISNASVEVVQGSRSVEARAVGVTKGAAIDRILGEIVHSKSMTSPIDYVLCIGHFLGKDEDIYAFFEPDLPSIGVGLPRSRLTTDAVKFPAERRPSSLKIPVSKNGPKSSSQNNKAQRPVSNSEKKTNNHIYSAPKRPAPEKISWNVLDLKKENYFSCAVGRTRTNARYTLGSSDDVVSFLMELADASLHS* 933
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02094 932 Gene3D - 680 762 - -
Rops3g02094 932 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 86 927 IPR001830 GO:0003824|GO:0005992
Rops3g02094 932 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 85 339 - -
Rops3g02094 932 Pfam Glycosyltransferase family 20 93 558 IPR001830 GO:0003824|GO:0005992
Rops3g02094 932 MobiDBLite consensus disorder prediction 61 84 - -
Rops3g02094 932 NCBIfam alpha,alpha-trehalose-phosphate synthase (UDP-forming) 93 558 IPR012766 GO:0003825|GO:0005992
Rops3g02094 932 CDD HAD_TPP 591 817 - -
Rops3g02094 932 Gene3D Glycogen Phosphorylase B; 85 339 - -
Rops3g02094 932 MobiDBLite consensus disorder prediction 843 870 - -
Rops3g02094 932 SUPERFAMILY HAD-like 590 925 IPR036412 -
Rops3g02094 932 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 92 560 - -
Rops3g02094 932 CDD GT20_TPS 93 558 IPR001830 GO:0003824|GO:0005992
Rops3g02094 932 Gene3D Glycogen Phosphorylase B; 340 543 - -
Rops3g02094 932 MobiDBLite consensus disorder prediction 827 878 - -
Rops3g02094 932 Pfam Trehalose-phosphatase 596 815 IPR003337 GO:0003824|GO:0005992
Rops3g02094 932 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 680 762 - -
Rops3g02094 932 Gene3D - 593 817 IPR023214 -
Rops3g02094 932 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like 340 542 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02094 Rops-Chr3 39403241 39434420 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02094 1 929 Trehalose Biosynthesis Gene Families AT1G78580 77.167 0.0 1477
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02094 K16055 - gmx:100797320 1629.77