Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02086 ATGACGCAGAAAAATCAGCTTAAGAAGGACAATAAAGAATTGGAGTTTTTCACTGAGTATGGGGATGCCAACAGATACAAGATTATTGAGTTTATAGGGAAGGGTAGCTATGGAGTTGTTTGTGCAGCAATTGACACGCACACAGGTGAAAAGGTTGCAATAAAGAAGATTCATGATATCTTTGAGCATATCTCTGATGCCATCAGAATCCTCCGTGAAGTCAAGTTGCTAAGGCTTTTAAGACACCCTGATATTGTTGAGATTAAGAGGATCATGTTGCCACCTTCAAAGAGAGAGTTTAAAGATATTTTTGTAGTCTTTGAGCTCATGGAGTCTGATCTCCATCAAGTCATCAAGGCTAATGATGACTTTACCCGTGAACACCATCAGTTTTTTCTTTATCAGTTGCTACGTGCGTTGAAGTATATGCATACAGCTAACGTATATCATAGAGATCTCAAGCCCAAAAATATATTGGCTAATGCAAACTGCAAACTCAAAGTTTGTGATTTTGGACTGGCAAGAGTTGCATTCAATGATGCCCCGGCAACAATATTTTGGACGGATTACGTTGCTACAAGATGGTATAGAGCCCCAGAGCTGTGTGGATCATTCTTTTCTAAGTACACACCAGCAATTGATATATGGAGCATTGGATGCATTTTTGCTGAGGTGCTGATGGGAAAGCCATTATTTCCTGGAAAAAGTGTTGTGCATCAATTAGATTTGATTACTGATCTTCTTGGGACACCATCACCAGAAACTATCACAGGAGTTCGAAATGATAACTCAAGGAAGTACTTGATGGGAATGCGGAAGAAACCTCCTGTGCCATTTGAACAGAAATTTCCCAATGCTGATCCATTGGCACTTCGCCTTCTGCAAAGGCTTCTAGCATTTGATCCAAAGGATCGGCCAACTGCTGAAGAGGCACTGGCTGATCCTTACTTCAAGGGCTTGGCTAAAGTTGAGAGAGAACCTTCGTGTAAGCCAATTTCAAAATTTGAATTTGAGTTTGAGAGGAGACGGATGACAAAGGAGGATGTTAGAGAACTAATATATCGAGAAATATTGGAATATCATCCTCAACTGCTCAAAGATTACATGAATGGAAGTGAAGGCGCAAACTTCCTCTATCCTAGTGCAGTAGATCAATTCAGAAAGCAATTTGCTCATCTTGAGGAAAACTATGATAAAAGTGGGCCAGTGCTTCCTCTAGAAAGAAAACATGTCTCCCTTCCAAGGTCCACTGTTCACTCTAGTACAATTCCTCCTAATACCCACTCAGCCCTTGCTTTGTATGAGAACAAGCAAACTGTAGATGAGGCATCTAAGAGTTTGAGAGCAGCAGAACCAAATTCTGGAAATCAATTAAGGGGTGTACAACCTTCACAACAGGTGCCAGCAGCTAAACCAGGGAGAGTTGTGGGGCCAGTTCTACACTTTGAAGATGAGAGAATCATGACATATTCTAATGACCCAAGGATCATTTACCAAAATACTCAAGCAGGCTCGACTCACTGTGTCGTCGGGGCCCATCTCCTAAACCCAAGGACTAGATCAGACATACACAAGGACTTTTCACAAGGCAATAATCAACACCCCTCCCAGCAGTTCAACTTACAAGCCAGACCAACCACTGATCTCAACACCAACCCATACTGCCAGCAATGCAAGAAGAATAACGTAAATCGGCCTGTAGCAGCTATTGATGCAAAACTACTGCAGGCACAATCTCAATTTGGTGCAGTTGGTGCTGCAGCAGTAGCCGTTGCCACTCATAGTCACAGGTATTCAAGGGGCGTTCAGTATGGATATTCATAG 1824 0.4216 MTQKNQLKKDNKELEFFTEYGDANRYKIIEFIGKGSYGVVCAAIDTHTGEKVAIKKIHDIFEHISDAIRILREVKLLRLLRHPDIVEIKRIMLPPSKREFKDIFVVFELMESDLHQVIKANDDFTREHHQFFLYQLLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFNDAPATIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLMGKPLFPGKSVVHQLDLITDLLGTPSPETITGVRNDNSRKYLMGMRKKPPVPFEQKFPNADPLALRLLQRLLAFDPKDRPTAEEALADPYFKGLAKVEREPSCKPISKFEFEFERRRMTKEDVRELIYREILEYHPQLLKDYMNGSEGANFLYPSAVDQFRKQFAHLEENYDKSGPVLPLERKHVSLPRSTVHSSTIPPNTHSALALYENKQTVDEASKSLRAAEPNSGNQLRGVQPSQQVPAAKPGRVVGPVLHFEDERIMTYSNDPRIIYQNTQAGSTHCVVGAHLLNPRTRSDIHKDFSQGNNQHPSQQFNLQARPTTDLNTNPYCQQCKKNNVNRPVAAIDAKLLQAQSQFGAVGAAAVAVATHSHRYSRGVQYGYS* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02086 607 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 25 367 - -
Rops3g02086 607 FunFam Mitogen-activated protein kinase 16 120 - -
Rops3g02086 607 MobiDBLite consensus disorder prediction 450 471 - -
Rops3g02086 607 Pfam Protein kinase domain 26 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g02086 607 SMART serkin_6 26 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g02086 607 ProSitePatterns MAP kinase signature. 61 164 IPR003527 GO:0004707|GO:0005524|GO:0006468
Rops3g02086 607 FunFam Mitogen-activated protein kinase 112 340 - -
Rops3g02086 607 SUPERFAMILY Protein kinase-like (PK-like) 22 321 IPR011009 -
Rops3g02086 607 ProSitePatterns Protein kinases ATP-binding region signature. 32 56 IPR017441 GO:0005524
Rops3g02086 607 ProSiteProfiles Protein kinase domain profile. 26 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops3g02086 607 MobiDBLite consensus disorder prediction 450 464 - -
Rops3g02086 607 Gene3D Transferase(Phosphotransferase) domain 1 112 340 - -
Rops3g02086 607 Gene3D Phosphorylase Kinase; domain 1 41 363 - -
Rops3g02086 607 CDD STKc_TDY_MAPK 25 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02086 Rops-Chr3 39263502 39272701 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02086 3 582 MAP Kinase Gene Family AT1G53510 68.509 0.0 788
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Rops3g02086 Pkinase 2.6e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02086 - - gmx:100800878 939.488