Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02085 ATGGAAGTTGATGCTGCTTTGGTAACACGTGTTGGATTTTGCATTGCAATTTTTACCATACTCCTAAGAAAAACACTGAATTGGTTATGGCTGGGGCCAAAAAGGGTAGAGACATGCCTCAGAGAACAAGGCCTAAAGGGAAACGCATACACGCTTTTATTTGGAGACCTTAAAGCAATGTCCACCATGCAACAGAAAGCTACATCTAAACCCATAAACATCAACGATGATGTTGTACCTCGTGTTGTTCCATTTCAACATCAATTGGTCAAAAATTATGGTAAGAATTCATTTTCTTGGTATGGTCCTAAGCCTTTTGTGTATATTATGAACCCTGAAGCAATAAAAGACGTTCTCAACAAGACAAATGACTTTGCAAAGCCGACCTATAATCCACTCGCCAAGTTCCTGATAACTGGACTTGTAGGCCTTGAGGATGAAAAATGGTCAAAACACAGAAAGATTATCAACCCTGCATTTAATCTGGTGAAGCTCAAGCTTGTGTTACCTGCAGTATATCATAGTTGTAACCATATGATAAACAAATGGATGATGTTAGTGTCAGGAAAGGGATCATGTGAGTTAGATGTTTGGCCTTTTCTAACTAGCTTATCAGGCGATGTGATTTCTCGTACGGCTTTCGGAAGTAGCTATGAGGAGGGAGGAAGAGTATTTGAACTCCAAAAGGAACAAGCTGAACTTACAGCCAAGGTCCTAACCTCTGTTTATGTTCCAGGATGGAGGTTTGTACCAACTAAATTGAACAAGAGGATGAAAGCAATTGAGAAAGAAATTCGAAACATACTTAGTGTAATTATCCAAAAACAGGAGATAGCTATGAAGACAGGAGAAGCTCTAAATGATAACTTATTGGGATTACTATTGGAATCCAATCATAAAGAGATTGAAGATCATGGGAATAACAACAATGTTGGGATGAATACTGATGATGTGATAAACGAGTGCAAGTTATTTTACTTTGCAGGACAAGAAACAACCTCGGTGCTACTTAATTGGACAATGGTGTTATTAAGCAGGTTTCCCAATTGGCAAATGCTAGCAAGGGAAGAGGTCTATGAAATTTTTGGCACCAATAAACCACACTATGATGGATTAAGTCGTCTAAAAGTTGTGACGATGATTTTGTATGAGGTTCTAAGACTTTACCCACCAGTTACAGCTATTATGAGAGTCGTAAGAAGGGACACTAGAGTTGGAAATTTGACTTTGCCAGCTGGAGCACTTGCTAATGTACCAGTCTTGTTGGTACACCATGATTTTGAACTTTGGGGTGATGATGCAAAAGAGTTCAAGCCAGAGAGATTCTCTGATGGAGTCTTGAAGGCTACAAAGGGTCAAGTTTCATTTCTCCCATTTGGATGGGGTCCTAGAATATGCATTGGGCAAAACTTTGCTTTGCTTGAGGCCAAAATGGCTATTTGCTTGATTTTACAACACTTCTCATTTGAGCTTTCGCCATCATATACCCATGCTCCATTTACGGTTTTGACCCTTCAGCCTCAATTTGGCACACCTATCATTTTACATAAATTGTAA 1557 0.3924 MEVDAALVTRVGFCIAIFTILLRKTLNWLWLGPKRVETCLREQGLKGNAYTLLFGDLKAMSTMQQKATSKPININDDVVPRVVPFQHQLVKNYGKNSFSWYGPKPFVYIMNPEAIKDVLNKTNDFAKPTYNPLAKFLITGLVGLEDEKWSKHRKIINPAFNLVKLKLVLPAVYHSCNHMINKWMMLVSGKGSCELDVWPFLTSLSGDVISRTAFGSSYEEGGRVFELQKEQAELTAKVLTSVYVPGWRFVPTKLNKRMKAIEKEIRNILSVIIQKQEIAMKTGEALNDNLLGLLLESNHKEIEDHGNNNNVGMNTDDVINECKLFYFAGQETTSVLLNWTMVLLSRFPNWQMLAREEVYEIFGTNKPHYDGLSRLKVVTMILYEVLRLYPPVTAIMRVVRRDTRVGNLTLPAGALANVPVLLVHHDFELWGDDAKEFKPERFSDGVLKATKGQVSFLPFGWGPRICIGQNFALLEAKMAICLILQHFSFELSPSYTHAPFTVLTLQPQFGTPIILHKL* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02085 518 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g02085 518 PRINTS P450 superfamily signature 328 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g02085 518 PRINTS P450 superfamily signature 380 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g02085 518 PRINTS P450 superfamily signature 466 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g02085 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
Rops3g02085 518 PRINTS E-class P450 group I signature 337 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g02085 518 PRINTS E-class P450 group I signature 393 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g02085 518 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g02085 518 PRINTS E-class P450 group I signature 90 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g02085 518 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g02085 518 PRINTS E-class P450 group I signature 204 222 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g02085 518 PRINTS E-class P450 group I signature 317 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g02085 518 CDD CYP72 83 514 - -
Rops3g02085 518 PANTHER CYTOCHROME P450 FAMILY MEMBER 24 510 - -
Rops3g02085 518 FunFam Cytochrome P450 734A1 30 518 - -
Rops3g02085 518 SUPERFAMILY Cytochrome P450 81 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g02085 518 Gene3D Cytochrome P450 74 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops3g02085 518 Pfam Cytochrome P450 86 494 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops3g02085 Rops-Chr3 39188309 39194754 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops3g02085 1 518 Cytochrome P450 AT3G14690 55.877 0.0 609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02085 - - gmx:100780475 838.95