Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops3g02080 ATGGGCACTGATGCAATGGGAAGGGAAGGGTACTCTCTGTTGAAGGATTTAAGATTGGAAATTGAAGTAAAGGAGGGAACTTTCTCTCTCTGCTTTTGGGTTTATTTGATGAACTCCACCACATTCCCTGCTACCATTATCCAGCAGGTTTACTCCGATATCTCCGAAAGTGCTCCTTTTCTTGTTATTAATGATAATAACAGAATCAATATCTTACCTGTTCTTCTCTTACATGAAGAAGCTCCTGACACTGGTAATATAAATTCCTGGACAGAGGTTCCACATGCAACTGCTGATTTTGAGTTTCCTTTGGAAAAATGGGTTCATGTTGGATGTAAGGTTTGTCCTAATCATATTCAGCTTCAGATTAATGGAGAGATTGTAGGAGAAAAGTCTTTGTCTTCCTTATCAAATAAGGAATCCAATTCAAGTAATTTGAAGAAAATAACTTTGGCCAATGTTGGTGGAGATGGACATAGTGTGCAGGGTTATGTGCACAATTTTGAAGTATCCCCTATTTTTTCTTCTATTAAGGATCACCATTTAAAGGATCCTCCTCTGAAGTTAACAATTGATGAATCATCTGCCTCTGAGATTGAAGAAGAAAGTGACGGTGTTTGGAGCATTATTGGTGGAAAGGCATCTTGTCGTAGGAACTTCTCTTTGGATGTTGTTCTGTCAGATGCCTTTGGACAGCCTGTAGATAAGGAGAATGAGCAGGTTTTTGCATCACTTTTGTATGCTGACACGGGGACTCCAGTGGAGAATACAACTGATGGAGAAGCACCCCTTTTGGCTAGCTTTGATGGAATTGAATTTTCTTCTTGTGAAAGACCAAGCAAACTTATGCTGGGCCGTGCATCATTTAAGCTCAAGATATCTCAGCTTTCATCCAAGTGTGATAACAGGTTGTTCCACATCAGATTTAGTGTTCCAAAATTAGGAAATTATCCTTTTCTTGAGACATATACTCGTCCAATTCGATGCATCTCCAGGAGCCGTAACACAAGACTATCCACTCTGGTGTGGAAGAGATCAACTTCTGCTCTTCATCGACTTAGTTTATCACAATCTTCAGCAATGGATGATGAGTCATTGGAACATTTGCATTCTGGTTGTGAAGCGAAAGCCAATCCACTGATTAAGCGGTTTAGAGTCGGACATGACAAGATATCTGTAACAGTGAAGGCTGACCCCTCCTTAGAGCAACCTGATGAGGAATGTAATTCTCATGTCTGGACTGCTAATCAGGTTGAGAATGGGTTTCCAACAAGCTTGGATGGCACACCTGCTAACTTCAATGAAGCAGATGACTCTCCATCTGATTCAGAGAGTACATGGGAGAGAAATTCACCTTCAAATAGTATGGCAAGTAGAAGATATCCAATATCTGATGTGACCATTTTCAAATACTGCTTGGCAGGCTTGGCTGAGAAATCTCTCATGCTTAAGGAAATTGCTATCTCTGCTTCTGACAAAGAAATTTCTGAGTTGGCTCATCATGTGTCACTCTATTCAGGATGTTCACACCATGGAAACCAAGTATTAATTGCCAAGAGATTAATAGAAGATGGAACTAATCTTTGGAAGGTGATATCTCCAAACAACCACCACATTCCTTGGGAGAGTGCAGTCTATGAGATTGAGGAGCAATTCATGAAGATTGCTTCTTGTGGTTCAAGATCTCTCTCACATCAGGACCTAGAGCTTCTGAAAAGGATTGCTGGATGTCAGGAGTATCTAACACAAGAGAACTTTGAGAAGTTGTGGTGCTGGTTGTACCCTGTTGCATTTACAATATCGAGGGACTGGATAAATCCTGTCTGGAATTCCACATCACCTAGATGGATTGAAGGATTCATTTCCAAGGATGAGGCAGAAGCTTCACTTCAAGGTCCCACAGGATTTCAAGAACCTGGTACCTTTGTACTTCGGTTCCCCGCCTCAAGAAGCTGGCCCCACCCTGATGCAGGTAGCCTAGTTGTGACTTATGTTGGCATTGACTACAAACTTCACCACAGACTACTTTCTATCGACCATGTTTATGGCTCTGGTGATAAAAGAATTGAGGTGAAACCATTGCAAGAAATGCTACTAGCAGAACCTGAGCTGTCTCGATTGGGAAGGATAATAAGAAGTCATTAA 2145 0.4126 MGTDAMGREGYSLLKDLRLEIEVKEGTFSLCFWVYLMNSTTFPATIIQQVYSDISESAPFLVINDNNRINILPVLLLHEEAPDTGNINSWTEVPHATADFEFPLEKWVHVGCKVCPNHIQLQINGEIVGEKSLSSLSNKESNSSNLKKITLANVGGDGHSVQGYVHNFEVSPIFSSIKDHHLKDPPLKLTIDESSASEIEEESDGVWSIIGGKASCRRNFSLDVVLSDAFGQPVDKENEQVFASLLYADTGTPVENTTDGEAPLLASFDGIEFSSCERPSKLMLGRASFKLKISQLSSKCDNRLFHIRFSVPKLGNYPFLETYTRPIRCISRSRNTRLSTLVWKRSTSALHRLSLSQSSAMDDESLEHLHSGCEAKANPLIKRFRVGHDKISVTVKADPSLEQPDEECNSHVWTANQVENGFPTSLDGTPANFNEADDSPSDSESTWERNSPSNSMASRRYPISDVTIFKYCLAGLAEKSLMLKEIAISASDKEISELAHHVSLYSGCSHHGNQVLIAKRLIEDGTNLWKVISPNNHHIPWESAVYEIEEQFMKIASCGSRSLSHQDLELLKRIAGCQEYLTQENFEKLWCWLYPVAFTISRDWINPVWNSTSPRWIEGFISKDEAEASLQGPTGFQEPGTFVLRFPASRSWPHPDAGSLVVTYVGIDYKLHHRLLSIDHVYGSGDKRIEVKPLQEMLLAEPELSRLGRIIRSH* 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops3g02080 714 Gene3D - 13 170 - -
Rops3g02080 714 ProSiteProfiles Src homology 2 (SH2) domain profile. 616 714 IPR000980 -
Rops3g02080 714 PANTHER SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION 25 705 IPR001217 GO:0003700|GO:0006355|GO:0007165
Rops3g02080 714 SUPERFAMILY SH2 domain 611 679 IPR036860 -
Rops3g02080 714 Pfam Concanavalin A-like lectin/glucanases superfamily 23 170 - -
Rops3g02080 714 Gene3D SH2 domain 602 709 IPR036860 -
Rops3g02080 714 MobiDBLite consensus disorder prediction 419 457 - -
Rops3g02080 714 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 170 IPR013320 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF STAT Rops3g02080 Laminin_G_3 1.2e-06 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops3g02080 - - gmx:100803169 1212.21